RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W YNL033WP53964 284 aa6.13□□□□□ -1.43
LSC1YOR142W YNL019CP53975 284 aa6.13□□□□□ -1.43
LSC1YOR142W RAD30Q04049 632 aa6.13□□□□□ -1.43
LSC1YOR142W SPC24Q04477 213 aa6.13□□□□□ -1.43
LSC1YOR142W SSQ1Q05931 657 aaPredicted RBP6.13□□□□□ -1.43
LSC1YOR142W MFG1Q07684 458 aa6.13□□□□□ -1.43
LSC1YOR142W PUS7Q08647 676 aaKnown RBP6.13□□□□□ -1.43
LSC1YOR142W MDM32Q12171 622 aa6.13□□□□□ -1.43
LSC1YOR142W RPL7BQ12213 244 aaKnown RBP6.13□□□□□ -1.43
LSC1YOR142W YRM1Q12340 786 aa6.13□□□□□ -1.43
LSC1YOR142W PSF1Q12488 208 aa6.13□□□□□ -1.43
LSC1YOR142W DAT1P13483 248 aaKnown RBP6.12□□□□□ -1.43
LSC1YOR142W CLB3P24870 427 aa6.12□□□□□ -1.43
LSC1YOR142W SSE1P32589 693 aaKnown RBP6.12□□□□□ -1.43
LSC1YOR142W PEX6P33760 1030 aa6.12□□□□□ -1.43
LSC1YOR142W TDP1P38319 544 aa6.12□□□□□ -1.43
LSC1YOR142W APS3P47064 194 aa6.12□□□□□ -1.43
LSC1YOR142W RNH70P53331 553 aa6.12□□□□□ -1.43
LSC1YOR142W ATG4P53867 494 aa6.12□□□□□ -1.43
LSC1YOR142W GTR1Q00582 310 aa6.12□□□□□ -1.43
LSC1YOR142W SKI8Q02793 397 aaPredicted RBP6.12□□□□□ -1.43
LSC1YOR142W ATP25Q03153 612 aa6.12□□□□□ -1.43
LSC1YOR142W NAT4Q04751 285 aa6.12□□□□□ -1.43
LSC1YOR142W BCP1Q06338 283 aa6.12□□□□□ -1.43
LSC1YOR142W YIG1Q08956 461 aa6.12□□□□□ -1.43
LSC1YOR142W PMR1P13586 950 aa6.11□□□□□ -1.43
LSC1YOR142W CBS1P14066 229 aa6.11□□□□□ -1.43
LSC1YOR142W PWP1P21304 576 aaKnown RBP6.11□□□□□ -1.43
LSC1YOR142W RPS1BP23248 255 aaKnown RBP6.11□□□□□ -1.43
LSC1YOR142W ATP7P30902 174 aa6.11□□□□□ -1.43
LSC1YOR142W MRP8P35719 219 aa6.11□□□□□ -1.43
LSC1YOR142W MCM7P38132 845 aa6.11□□□□□ -1.43
LSC1YOR142W ZTA1P38230 334 aaKnown RBP6.11□□□□□ -1.43
LSC1YOR142W YHR218WP38899 603 aa6.11□□□□□ -1.43
LSC1YOR142W YLR460CP54007 376 aa6.11□□□□□ -1.43
LSC1YOR142W CTL1Q03220 320 aaKnown RBP6.11□□□□□ -1.43
LSC1YOR142W ACL4Q03771 387 aa6.11□□□□□ -1.43
LSC1YOR142W ATG26Q06321 1198 aa6.11□□□□□ -1.43
LSC1YOR142W PSR1Q07800 427 aa6.11□□□□□ -1.43
LSC1YOR142W GPN2Q08726 347 aaPredicted RBP6.11□□□□□ -1.43
LSC1YOR142W YOR342CQ12182 319 aa6.11□□□□□ -1.43
LSC1YOR142W RPS21BQ3E754 87 aaKnown RBP6.11□□□□□ -1.43
LSC1YOR142W TAD3Q9URQ3 322 aa6.11□□□□□ -1.43
LSC1YOR142W MF(ALPHA)1P01149 165 aa6.1□□□□□ -1.43
LSC1YOR142W RNA1P11745 407 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W GAL3P13045 520 aa6.1□□□□□ -1.43
LSC1YOR142W THR1P17423 357 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W CTR86P25355 563 aa6.1□□□□□ -1.43
LSC1YOR142W PDB1P32473 366 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W HSP150P32478 413 aa6.1□□□□□ -1.43
LSC1YOR142W DHR2P36009 735 aaPredicted RBP6.1□□□□□ -1.43
LSC1YOR142W TSL1P38427 1098 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W TDA11P38854 504 aa6.1□□□□□ -1.43
LSC1YOR142W DSS1P39112 969 aa6.1□□□□□ -1.43
LSC1YOR142W YEL057CP39983 233 aa6.1□□□□□ -1.43
LSC1YOR142W ECM10P39987 644 aa6.1□□□□□ -1.43
LSC1YOR142W IRC6P43615 237 aa6.1□□□□□ -1.43
LSC1YOR142W AAD10P47182 288 aa6.1□□□□□ -1.43
LSC1YOR142W GET1P53192 235 aa6.1□□□□□ -1.43
LSC1YOR142W HOL1P53389 586 aa6.1□□□□□ -1.43
LSC1YOR142W YNL181WP53878 407 aa6.1□□□□□ -1.43
LSC1YOR142W MTQ1P53944 314 aa6.1□□□□□ -1.43
LSC1YOR142W SWP1Q02795 286 aa6.1□□□□□ -1.43
LSC1YOR142W NCE101Q02820 53 aa6.1□□□□□ -1.43
LSC1YOR142W PAL1Q05518 499 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W WTM1Q12363 437 aaKnown RBP6.1□□□□□ -1.43
LSC1YOR142W RAD7P06779 565 aa6.09□□□□□ -1.43
LSC1YOR142W ADE5,7P07244 802 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W MSS18P08593 268 aa6.09□□□□□ -1.43
LSC1YOR142W KGD1P20967 1014 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W YCK1P23291 538 aa6.09□□□□□ -1.43
LSC1YOR142W YOR062CP36025 268 aa6.09□□□□□ -1.43
LSC1YOR142W GRE3P38715 327 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
LSC1YOR142W ECM34P38728 170 aa6.09□□□□□ -1.43
LSC1YOR142W RPS26AP39938 119 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W RPS26BP39939 119 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W RSP5P39940 809 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W AST2P39945 430 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W YNL208WP40159 199 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W GID8P40208 455 aa6.09□□□□□ -1.43
LSC1YOR142W ALG5P40350 334 aa6.09□□□□□ -1.43
LSC1YOR142W SMK1P41808 388 aa6.09□□□□□ -1.43
LSC1YOR142W SHR5P41912 237 aa6.09□□□□□ -1.43
LSC1YOR142W RPE1P46969 238 aa6.09□□□□□ -1.43
LSC1YOR142W NOP9P47077 666 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W EMC2P47133 292 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W TOS2P50078 622 aa6.09□□□□□ -1.43
LSC1YOR142W SYF2P53277 215 aaPredicted RBP6.09□□□□□ -1.43
LSC1YOR142W GPI1P53306 609 aa6.09□□□□□ -1.43
LSC1YOR142W YPL068CQ02749 293 aa6.09□□□□□ -1.43
LSC1YOR142W SRP1Q02821 542 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W FDC1Q03034 503 aa6.09□□□□□ -1.43
LSC1YOR142W YDR541CQ03049 344 aa6.09□□□□□ -1.43
LSC1YOR142W YMR102CQ03177 834 aa6.09□□□□□ -1.43
LSC1YOR142W CGI121Q03705 181 aaKnown RBP6.09□□□□□ -1.43
LSC1YOR142W GPI11Q06636 219 aa6.09□□□□□ -1.43
LSC1YOR142W MOD5P07884 428 aa6.08□□□□□ -1.44
LSC1YOR142W RPL43AP0CX25 92 aaKnown RBP6.08□□□□□ -1.44
LSC1YOR142W RPL43BP0CX26 92 aa6.08□□□□□ -1.44
LSC1YOR142W ARF1P11076 181 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms