RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
CSL4	YNL232W	PEX6	P33760	1030 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	YMR262W	P38430	313 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	YRB1	P41920	201 aa	Known RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	SSY5	P47002	699 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	ALB1	P47019	175 aa	Predicted RBP	5.26	□□□□□ -1.57
CSL4	YNL232W	YGR016W	P53209	190 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	IMO32	P53219	342 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	MAL12	P53341	584 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	TIM10	P87108	93 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	ECI1	Q05871	280 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	ESA1	Q08649	445 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	YMR030W-A	Q3E760	96 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	MTR10	Q99189	972 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	Q0010	Q9ZZX9	128 aa		5.26	□□□□□ -1.57
CSL4	YNL232W	YLR415C	O13578	112 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	RPL20A	P0CX23	172 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	RPL20B	P0CX24	172 aa	Predicted RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	GPA2	P10823	449 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	TOP3	P13099	656 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	SRV2	P17555	526 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	MDM10	P18409	493 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	CDC43	P18898	376 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	GFD2	P25370	566 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	THI4	P32318	326 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	RIM1	P32445	135 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	NGG1	P32494	702 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	EMP70	P32802	667 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	PTH2	P34222	208 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	SNU114	P36048	1008 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	YMR144W	P40214	342 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	SEC28	P40509	296 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	PGU1	P47180	361 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	ATP22	P50273	684 aa	Predicted RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	MPA43	P53583	542 aa	Predicted RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	IBD2	P53892	351 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	UTP6	Q02354	440 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	EFR3	Q03653	782 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	LRS4	Q04087	347 aa	Known RBP	5.25	□□□□□ -1.57
CSL4	YNL232W	MDY2	Q12285	212 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	TMA17	Q12513	150 aa		5.25	□□□□□ -1.57
CSL4	YNL232W	CDC36	P06100	191 aa	Predicted RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	SPT3	P06844	337 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-LR1	P0C2J4	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-F	P0CX61	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-GR2	P0CX62	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	SGV1	P23293	657 aa	Known RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-C	P25383	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	RAD51	P25454	400 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YCL002C	P25565	263 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	ARE1	P25628	610 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	STO1	P34160	861 aa	Known RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	LOT5	P34234	306 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	PTH1	P38876	190 aa	Known RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
CSL4	YNL232W	MIC19	P43594	170 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	NMD5	P46970	1048 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	COG6	P53959	839 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TIM11	P81449	96 aa	Predicted RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	YPL107W	Q02873	248 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	NAN1	Q02931	896 aa	Known RBP	5.24	□□□□□ -1.57
CSL4	YNL232W	MSC1	Q03104	513 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-DR2	Q03483	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	ASM4	Q05166	528 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YLR446W	Q06204	433 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	RIF2	Q06208	395 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YLR177W	Q06251	628 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YEH1	Q07804	573 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-B	Q12260	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-OR2	Q12293	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-DR1	Q12392	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-OR1	Q12439	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YPL247C	Q12523	523 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YOS9	Q99220	542 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	YOR019W	Q99248	730 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	TY2A-DR3	Q99303	438 aa		5.24	□□□□□ -1.57
CSL4	YNL232W	HIS7	P33734	552 aa	Known RBP	5.23	□□□□□ -1.57
CSL4	YNL232W	DOA1	P36037	715 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	BET3	P36149	193 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	SEN34	P39707	275 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	MPS3	P47069	682 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	ATP25	Q03153	612 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	CSN9	Q03981	162 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	PLM2	Q04383	521 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	SEI1	Q06058	285 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	YLL007C	Q07799	665 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	PSR1	Q07800	427 aa		5.23	□□□□□ -1.57
CSL4	YNL232W	PFK27	Q12471	397 aa	Predicted RBP	5.23	□□□□□ -1.57
CSL4	YNL232W	RPS17A	P02407	136 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	RPS17B	P14127	136 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	ERD1	P16151	362 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	SLM5	P25345	492 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	PAP1	P29468	568 aa	Known RBP	5.22	□□□□□ -1.57
CSL4	YNL232W	GLG1	P36143	616 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	BMT2	P38278	337 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	YJL206C	P39529	758 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	SOK1	P40317	901 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	YIL001W	P40560	513 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	SHR5	P41912	237 aa		5.22	□□□□□ -1.57
CSL4	YNL232W	UPF3	P48412	387 aa	Known RBP	5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms