RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YDL218WQ07629 317 aa1.62□□□□□ -2.15
SFB2YNL049C YDL007C-AQ2V2Q0 85 aa1.62□□□□□ -2.15
SFB2YNL049C BUD5P25300 642 aaPredicted RBP1.62□□□□□ -2.15
SFB2YNL049C PBN1P25580 416 aa1.62□□□□□ -2.15
SFB2YNL049C PAP1P29468 568 aaKnown RBP1.62□□□□□ -2.15
SFB2YNL049C SRB2P34162 210 aa1.62□□□□□ -2.15
SFB2YNL049C YKL100CP34248 587 aa1.62□□□□□ -2.15
SFB2YNL049C DTR1P38125 572 aa1.62□□□□□ -2.15
SFB2YNL049C THI2P38141 450 aa1.62□□□□□ -2.15
SFB2YNL049C YMR262WP38430 313 aa1.62□□□□□ -2.15
SFB2YNL049C DED81P38707 554 aaKnown RBP1.62□□□□□ -2.15
SFB2YNL049C OTU2P38747 307 aaKnown RBP1.62□□□□□ -2.15
SFB2YNL049C YHR045WP38775 560 aa1.62□□□□□ -2.15
SFB2YNL049C RIX1P38883 763 aaPredicted RBP1.62□□□□□ -2.15
SFB2YNL049C AIM18P38884 321 aa1.62□□□□□ -2.15
SFB2YNL049C HXT9P40885 567 aa1.62□□□□□ -2.15
SFB2YNL049C ZIM17P42844 174 aa1.62□□□□□ -2.15
SFB2YNL049C COG7P53195 279 aa1.62□□□□□ -2.15
SFB2YNL049C ATP23P53722 227 aa1.62□□□□□ -2.15
SFB2YNL049C RCF1Q03713 159 aa1.62□□□□□ -2.15
SFB2YNL049C MLH2Q07980 695 aa1.62□□□□□ -2.15
SFB2YNL049C THI20Q08224 551 aa1.62□□□□□ -2.15
SFB2YNL049C YDR018CQ12185 396 aa1.62□□□□□ -2.15
SFB2YNL049C NCE102Q12207 173 aaRIP-Chip data1.62□□□□□ -2.15not detected
SFB2YNL049C AFI1Q99222 893 aa1.62□□□□□ -2.15
SFB2YNL049C HSP82P02829 709 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C ARG81P05085 880 aa1.61□□□□□ -2.15
SFB2YNL049C PUT2P07275 575 aa1.61□□□□□ -2.15
SFB2YNL049C YMR085WP0CF18 432 aa1.61□□□□□ -2.15
SFB2YNL049C ARF2P19146 181 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C EPT1P22140 391 aa1.61□□□□□ -2.15
SFB2YNL049C YIM1P28625 365 aa1.61□□□□□ -2.15
SFB2YNL049C UBA4P38820 440 aa1.61□□□□□ -2.15
SFB2YNL049C CYC2P38909 366 aa1.61□□□□□ -2.15
SFB2YNL049C PRP39P39682 629 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C PSA1P41940 361 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C IRC7P43623 340 aa1.61□□□□□ -2.15
SFB2YNL049C PKP2P53170 491 aa1.61□□□□□ -2.15
SFB2YNL049C SPG3Q04398 127 aaPredicted RBP1.61□□□□□ -2.15
SFB2YNL049C YOS9Q99220 542 aa1.61□□□□□ -2.15
SFB2YNL049C YBR056W-AI2HB52 66 aa1.61□□□□□ -2.15
SFB2YNL049C CPA1P07258 411 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C PEP4P07267 405 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C TUB1P09733 447 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C RPL31BP0C2H9 113 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C VPS1P21576 704 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C URE2P23202 354 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C SGV1P23293 657 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C SPS22P25380 463 aa1.61□□□□□ -2.15
SFB2YNL049C YBR056WP38081 501 aa1.61□□□□□ -2.15
SFB2YNL049C YBR139WP38109 508 aa1.61□□□□□ -2.15
SFB2YNL049C CIN4P39110 191 aa1.61□□□□□ -2.15
SFB2YNL049C YEL073CP39974 107 aa1.61□□□□□ -2.15
SFB2YNL049C YMR144WP40214 342 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C JEM1P40358 645 aa1.61□□□□□ -2.15
SFB2YNL049C DRN1P53255 507 aaKnown RBP1.61□□□□□ -2.15
SFB2YNL049C KTR5P53966 522 aaPredicted RBP1.61□□□□□ -2.15
SFB2YNL049C CIK1Q01649 594 aa1.61□□□□□ -2.15
SFB2YNL049C SPP2Q02521 185 aa1.61□□□□□ -2.15
SFB2YNL049C RSC9Q03124 581 aa1.61□□□□□ -2.15
SFB2YNL049C SOV1Q04748 898 aa1.61□□□□□ -2.15
SFB2YNL049C PGC1Q08959 321 aa1.61□□□□□ -2.15
SFB2YNL049C GLE1Q12315 538 aa1.61□□□□□ -2.15
SFB2YNL049C BCY1P07278 416 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C ERG11P10614 530 aa1.6□□□□□ -2.15
SFB2YNL049C RSR1P13856 272 aa1.6□□□□□ -2.15
SFB2YNL049C REC107P21651 314 aa1.6□□□□□ -2.15
SFB2YNL049C COQ3P27680 312 aa1.6□□□□□ -2.15
SFB2YNL049C SEC1P30619 724 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C SPC110P32380 944 aa1.6□□□□□ -2.15
SFB2YNL049C TUL1P36096 758 aa1.6□□□□□ -2.15
SFB2YNL049C FAA2P39518 744 aa1.6□□□□□ -2.15
SFB2YNL049C XBP1P40489 647 aa1.6□□□□□ -2.15
SFB2YNL049C ULP2P40537 1034 aaPredicted RBP1.6□□□□□ -2.15
SFB2YNL049C GDS1P41913 522 aa1.6□□□□□ -2.15
SFB2YNL049C MPS2P53159 387 aa1.6□□□□□ -2.15
SFB2YNL049C YGR126WP53274 230 aa1.6□□□□□ -2.15
SFB2YNL049C BUD32P53323 261 aa1.6□□□□□ -2.15
SFB2YNL049C ARP5P53946 755 aa1.6□□□□□ -2.15
SFB2YNL049C RPL22BP56628 122 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C OAZ1Q02803 292 aa1.6□□□□□ -2.15
SFB2YNL049C SWF1Q04629 336 aa1.6□□□□□ -2.15
SFB2YNL049C VTA1Q06263 330 aa1.6□□□□□ -2.15
SFB2YNL049C ATG10Q07879 167 aa1.6□□□□□ -2.15
SFB2YNL049C PML1Q07930 204 aaPredicted RBP1.6□□□□□ -2.15
SFB2YNL049C AAD15Q08361 143 aa1.6□□□□□ -2.15
SFB2YNL049C RRI1Q12468 440 aa1.6□□□□□ -2.15
SFB2YNL049C IZH4Q99393 312 aa1.6□□□□□ -2.15
SFB2YNL049C COR1P07256 457 aa1.6□□□□□ -2.15
SFB2YNL049C MDH1P17505 334 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
SFB2YNL049C CLC1P17891 233 aa1.6□□□□□ -2.15
SFB2YNL049C CPR2P23285 205 aa1.6□□□□□ -2.15
SFB2YNL049C CNA1P23287 553 aa1.6□□□□□ -2.15
SFB2YNL049C SPB1P25582 841 aaPredicted RBP1.6□□□□□ -2.15
SFB2YNL049C IDH2P28241 369 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C FAA1P30624 700 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C AEP1P32493 518 aa1.6□□□□□ -2.15
SFB2YNL049C NIP1P32497 812 aaKnown RBP1.6□□□□□ -2.15
SFB2YNL049C YME2P32843 850 aa1.6□□□□□ -2.15
SFB2YNL049C YBP1P38315 674 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 91.2 ms