RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeastyeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP5YMR229C CEG1Q01159 459 aaPredicted RBP3.18□□□□□ -1.9
RRP5YMR229C NGL2Q03264 515 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C HAS1Q03532 505 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C YMR130WQ04223 302 aa3.18□□□□□ -1.9
RRP5YMR229C YLR446WQ06204 433 aa3.18□□□□□ -1.9
RRP5YMR229C RRP12Q12754 1228 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C YLR099W-AQ3E798 87 aa3.18□□□□□ -1.9
RRP5YMR229C YOR019WQ99248 730 aa3.18□□□□□ -1.9
RRP5YMR229C PRB1P09232 635 aa3.18□□□□□ -1.9
RRP5YMR229C HOM3P10869 527 aa3.18□□□□□ -1.9
RRP5YMR229C SNF6P18888 332 aa3.18□□□□□ -1.9
RRP5YMR229C PRI2P20457 528 aa3.18□□□□□ -1.9
RRP5YMR229C AHC2P25649 128 aa3.18□□□□□ -1.9
RRP5YMR229C FUN26P31381 517 aa3.18□□□□□ -1.9
RRP5YMR229C APE2P32454 952 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C YBR056WP38081 501 aa3.18□□□□□ -1.9
RRP5YMR229C DTR1P38125 572 aa3.18□□□□□ -1.9
RRP5YMR229C YIR016WP40572 265 aa3.18□□□□□ -1.9
RRP5YMR229C PSA1P41940 361 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C RIM21P48565 533 aa3.18□□□□□ -1.9
RRP5YMR229C OGG1P53397 376 aaPredicted RBP3.18□□□□□ -1.9
RRP5YMR229C VAC7P53950 1165 aa3.18□□□□□ -1.9
RRP5YMR229C YDR248CQ03786 193 aa3.18□□□□□ -1.9
RRP5YMR229C RRP45Q05636 305 aaKnown RBP3.18□□□□□ -1.9
RRP5YMR229C RRP42Q12277 265 aaPredicted RBP3.18□□□□□ -1.9
RRP5YMR229C RAS1P01119 309 aa3.17□□□□□ -1.9
RRP5YMR229C MER1P16523 270 aa3.17□□□□□ -1.9
RRP5YMR229C GLN3P18494 730 aa3.17□□□□□ -1.9
RRP5YMR229C SAT4P25333 603 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C ARO7P32178 256 aa3.17□□□□□ -1.9
RRP5YMR229C SOF1P33750 489 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C GRE3P38715 327 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
RRP5YMR229C MNN9P39107 395 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C UTP7P40055 554 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C NDE1P40215 560 aa3.17□□□□□ -1.9
RRP5YMR229C AYR1P40471 297 aa3.17□□□□□ -1.9
RRP5YMR229C HXT9P40885 567 aa3.17□□□□□ -1.9
RRP5YMR229C YGR201CP42936 225 aa3.17□□□□□ -1.9
RRP5YMR229C RBG2P53295 368 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C GPI17Q04080 534 aa3.17□□□□□ -1.9
RRP5YMR229C REH1Q06709 432 aa3.17□□□□□ -1.9
RRP5YMR229C YKL033W-AQ86ZR7 236 aa3.17□□□□□ -1.9
RRP5YMR229C TMA19P35691 167 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C INM1P38710 295 aa3.17□□□□□ -1.9
RRP5YMR229C SSY5P47002 699 aa3.17□□□□□ -1.9
RRP5YMR229C YJL016WP47072 561 aa3.17□□□□□ -1.9
RRP5YMR229C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
RRP5YMR229C ECM11Q04110 302 aa3.17□□□□□ -1.9
RRP5YMR229C DCI1Q08558 271 aa3.17□□□□□ -1.9
RRP5YMR229C NSI1Q12457 570 aa3.17□□□□□ -1.9
RRP5YMR229C FLP1P03870 423 aa3.17□□□□□ -1.9
RRP5YMR229C CHS1P08004 1131 aa3.17□□□□□ -1.9
RRP5YMR229C CYS3P31373 394 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C SIP2P34164 415 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C UTP30P36144 274 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C LSM12P38828 187 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C EDC3P39998 551 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C YIL165CP40446 119 aa3.17□□□□□ -1.9
RRP5YMR229C YJL171CP46992 396 aa3.17□□□□□ -1.9
RRP5YMR229C MRX6P48564 524 aa3.17□□□□□ -1.9
RRP5YMR229C GOT1Q03554 138 aa3.17□□□□□ -1.9
RRP5YMR229C PML39Q03760 334 aa3.17□□□□□ -1.9
RRP5YMR229C GLO2Q05584 274 aa3.17□□□□□ -1.9
RRP5YMR229C YLR456WQ06199 204 aa3.17□□□□□ -1.9
RRP5YMR229C LUC7Q07508 261 aaPredicted RBP3.17□□□□□ -1.9
RRP5YMR229C NGL1Q08213 363 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C RCN2Q12044 265 aa3.17□□□□□ -1.9
RRP5YMR229C WHI5Q12416 295 aa3.17□□□□□ -1.9
RRP5YMR229C GAL4P04386 881 aa3.17□□□□□ -1.9
RRP5YMR229C PBN1P25580 416 aa3.17□□□□□ -1.9
RRP5YMR229C SYP1P25623 870 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C SET3P36124 751 aa3.17□□□□□ -1.9
RRP5YMR229C MRPL3P36516 390 aa3.17□□□□□ -1.9
RRP5YMR229C MAP2P38174 421 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C YBR225WP38321 900 aa3.17□□□□□ -1.9
RRP5YMR229C PRS3P38689 320 aaKnown RBP3.17□□□□□ -1.9
RRP5YMR229C RIM4P38741 713 aa3.17□□□□□ -1.9
RRP5YMR229C PCL5P38794 229 aa3.17□□□□□ -1.9
RRP5YMR229C CEM1P39525 442 aa3.17□□□□□ -1.9
RRP5YMR229C BOL3P39724 118 aa3.17□□□□□ -1.9
RRP5YMR229C UBX6P47049 396 aa3.17□□□□□ -1.9
RRP5YMR229C MCM22P47167 239 aa3.17□□□□□ -1.9
RRP5YMR229C HXT16P47185 567 aa3.17□□□□□ -1.9
RRP5YMR229C EXG2P52911 562 aa3.17□□□□□ -1.9
RRP5YMR229C PPT1P53043 513 aa3.17□□□□□ -1.9
RRP5YMR229C YSA1Q01976 231 aa3.17□□□□□ -1.9
RRP5YMR229C IPK1Q06667 281 aa3.17□□□□□ -1.9
RRP5YMR229C SYC1Q08553 188 aaPredicted RBP3.17□□□□□ -1.9
RRP5YMR229C RAD10P06838 210 aa3.16□□□□□ -1.9
RRP5YMR229C CWP1P28319 239 aa3.16□□□□□ -1.9
RRP5YMR229C NAB2P32505 525 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
RRP5YMR229C ORC2P32833 620 aa3.16□□□□□ -1.9
RRP5YMR229C ROT2P38138 954 aa3.16□□□□□ -1.9
RRP5YMR229C YBR053CP38235 358 aa3.16□□□□□ -1.9
RRP5YMR229C IRC18P47056 224 aa3.16□□□□□ -1.9
RRP5YMR229C PRM8P53174 237 aa3.16□□□□□ -1.9
RRP5YMR229C TRM112P53738 135 aaPredicted RBP3.16□□□□□ -1.9
RRP5YMR229C ACS1Q01574 713 aa3.16□□□□□ -1.9
RRP5YMR229C REX3Q12090 404 aa3.16□□□□□ -1.9
RRP5YMR229C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms