RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C ANR2P36090 516 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C PBP2P38151 413 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
YMR050CYMR050C RFT1P38206 574 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C GRE3P38715 327 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
YMR050CYMR050C YPT35P38815 214 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C EGD2P38879 174 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C ECM10P39987 644 aa2.5□□□□□ -2.01
YMR050CYMR050C YIL108WP40483 696 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C SER33P40510 469 aa2.5□□□□□ -2.01
YMR050CYMR050C PKP1P40530 394 aa2.5□□□□□ -2.01
YMR050CYMR050C PFA3P42836 336 aa2.5□□□□□ -2.01
YMR050CYMR050C QRI7P43122 407 aa2.5□□□□□ -2.01
YMR050CYMR050C UBC13P52490 153 aa2.5□□□□□ -2.01
YMR050CYMR050C YGL101WP53144 215 aa2.5□□□□□ -2.01
YMR050CYMR050C MTL1P53214 551 aa2.5□□□□□ -2.01
YMR050CYMR050C CUS2P53830 285 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C URH1Q04179 340 aa2.5□□□□□ -2.01
YMR050CYMR050C SEC13Q04491 297 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C TRI1Q05024 226 aa2.5□□□□□ -2.01
YMR050CYMR050C BRX1Q08235 291 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C REP1P03871 373 aa2.5□□□□□ -2.01
YMR050CYMR050C TRX1P22217 103 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C VPS34P22543 875 aa2.5□□□□□ -2.01
YMR050CYMR050C RRP43P25359 394 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C YCR015CP25616 317 aa2.5□□□□□ -2.01
YMR050CYMR050C SYP1P25623 870 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C INO2P26798 304 aa2.5□□□□□ -2.01
YMR050CYMR050C GUT2P32191 649 aa2.5□□□□□ -2.01
YMR050CYMR050C ECM15P35195 104 aa2.5□□□□□ -2.01
YMR050CYMR050C RKM3P38222 552 aa2.5□□□□□ -2.01
YMR050CYMR050C NTC20P38302 140 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C MGE1P38523 228 aa2.5□□□□□ -2.01
YMR050CYMR050C SIC1P38634 284 aa2.5□□□□□ -2.01
YMR050CYMR050C ARP1P38696 384 aa2.5□□□□□ -2.01
YMR050CYMR050C YND1P40009 630 aa2.5□□□□□ -2.01
YMR050CYMR050C UTP7P40055 554 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C GET2P40056 285 aa2.5□□□□□ -2.01
YMR050CYMR050C COX16P47081 118 aa2.5□□□□□ -2.01
YMR050CYMR050C YJR012CP47087 207 aa2.5□□□□□ -2.01
YMR050CYMR050C EMC2P47133 292 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C KEL2P50090 882 aa2.5□□□□□ -2.01
YMR050CYMR050C SBH2P52871 88 aa2.5□□□□□ -2.01
YMR050CYMR050C RCF2P53721 224 aa2.5□□□□□ -2.01
YMR050CYMR050C YMR130WQ04223 302 aa2.5□□□□□ -2.01
YMR050CYMR050C KAR5Q04746 504 aa2.5□□□□□ -2.01
YMR050CYMR050C YMR254CQ04838 102 aa2.5□□□□□ -2.01
YMR050CYMR050C CRR1Q05790 422 aa2.5□□□□□ -2.01
YMR050CYMR050C ARR2Q06597 130 aa2.5□□□□□ -2.01
YMR050CYMR050C SKI7Q08491 747 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C BTS1Q12051 335 aa2.5□□□□□ -2.01
YMR050CYMR050C MF(ALPHA)1P01149 165 aa2.5□□□□□ -2.01
YMR050CYMR050C RPL25P04456 142 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C HIP1P06775 603 aa2.5□□□□□ -2.01
YMR050CYMR050C RPS23AP0CX29 145 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C RPS23BP0CX30 145 aa2.5□□□□□ -2.01
YMR050CYMR050C ADH4P10127 382 aa2.5□□□□□ -2.01
YMR050CYMR050C IDP1P21954 428 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C YCR101CP25607 182 aa2.5□□□□□ -2.01
YMR050CYMR050C YJU3P28321 313 aa2.5□□□□□ -2.01
YMR050CYMR050C GLC7P32598 312 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C KKQ8P36004 724 aa2.5□□□□□ -2.01
YMR050CYMR050C RRN3P36070 627 aa2.5□□□□□ -2.01
YMR050CYMR050C YBR220CP38318 560 aa2.5□□□□□ -2.01
YMR050CYMR050C HRB1P38922 454 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
YMR050CYMR050C RPL13BP40212 199 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C DLS1P40366 167 aa2.5□□□□□ -2.01
YMR050CYMR050C TED1P40533 473 aa2.5□□□□□ -2.01
YMR050CYMR050C DIM1P41819 318 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C FIG4P42837 879 aa2.5□□□□□ -2.01
YMR050CYMR050C PET130P47065 347 aa2.5□□□□□ -2.01
YMR050CYMR050C MTQ1P53944 314 aa2.5□□□□□ -2.01
YMR050CYMR050C ERV25P54837 211 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C RPL6AQ02326 176 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C ROD1Q02805 837 aa2.5□□□□□ -2.01
YMR050CYMR050C YML119WQ03208 357 aa2.5□□□□□ -2.01
YMR050CYMR050C EFR3Q03653 782 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C TRS23Q03784 219 aa2.5□□□□□ -2.01
YMR050CYMR050C RIF2Q06208 395 aa2.5□□□□□ -2.01
YMR050CYMR050C HBT1Q07653 1046 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C DIA2Q08496 732 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C UIP4Q08926 304 aa2.5□□□□□ -2.01
YMR050CYMR050C SAM4Q08985 325 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C TGS1Q12052 315 aa2.5□□□□□ -2.01
YMR050CYMR050C DAS2Q12084 232 aa2.5□□□□□ -2.01
YMR050CYMR050C PAR32Q12515 295 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C RPL13AQ12690 199 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C VPS33P20795 691 aa2.5□□□□□ -2.01
YMR050CYMR050C SEC65P29478 273 aa2.5□□□□□ -2.01
YMR050CYMR050C ERG1P32476 496 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C NGG1P32494 702 aa2.5□□□□□ -2.01
YMR050CYMR050C RPC34P32910 317 aa2.5□□□□□ -2.01
YMR050CYMR050C YFL052WP43551 465 aa2.5□□□□□ -2.01
YMR050CYMR050C PHO86P46956 311 aa2.5□□□□□ -2.01
YMR050CYMR050C ILM1P47155 203 aa2.5□□□□□ -2.01
YMR050CYMR050C MCM22P47167 239 aa2.5□□□□□ -2.01
YMR050CYMR050C NSA1P53136 463 aaPredicted RBP2.5□□□□□ -2.01
YMR050CYMR050C SNF12P53628 566 aa2.5□□□□□ -2.01
YMR050CYMR050C YNL181WP53878 407 aa2.5□□□□□ -2.01
YMR050CYMR050C PFA5Q03289 374 aa2.5□□□□□ -2.01
YMR050CYMR050C BRE4Q07660 1125 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms