RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	RBG1	P39729	369 aa		3.55	□□□□□ -1.84
YPT7	YML001W	MTW1	P39731	289 aa		3.55	□□□□□ -1.84
YPT7	YML001W	AVT6	P40074	448 aa		3.55	□□□□□ -1.84
YPT7	YML001W	YJL070C	P40361	888 aa		3.55	□□□□□ -1.84
YPT7	YML001W	MNT3	P40549	630 aa		3.55	□□□□□ -1.84
YPT7	YML001W	IST3	P40565	148 aa	Predicted RBP	3.55	□□□□□ -1.84
YPT7	YML001W	IMA5	P40884	581 aa		3.55	□□□□□ -1.84
YPT7	YML001W	MSS2	P40990	351 aa		3.55	□□□□□ -1.84
YPT7	YML001W	IRC6	P43615	237 aa		3.55	□□□□□ -1.84
YPT7	YML001W	STB2	P46679	850 aa		3.55	□□□□□ -1.84
YPT7	YML001W	TIS11	P47977	285 aa		3.55	□□□□□ -1.84
YPT7	YML001W	IMA1	P53051	589 aa		3.55	□□□□□ -1.84
YPT7	YML001W	STR3	P53101	465 aa	Known RBP	3.55	□□□□□ -1.84
YPT7	YML001W	PXR1	P53335	271 aa	Predicted RBP	3.55	□□□□□ -1.84
YPT7	YML001W	DSL1	P53847	754 aa		3.55	□□□□□ -1.84
YPT7	YML001W	YNL181W	P53878	407 aa		3.55	□□□□□ -1.84
YPT7	YML001W	YNL095C	P53932	642 aa		3.55	□□□□□ -1.84
YPT7	YML001W	IDP3	P53982	420 aa	Known RBP	3.55	□□□□□ -1.84
YPT7	YML001W	TIM11	P81449	96 aa	Predicted RBP	3.55	□□□□□ -1.84
YPT7	YML001W	PNG1	Q02890	363 aa		3.55	□□□□□ -1.84
YPT7	YML001W	SMP3	Q04174	516 aa		3.55	□□□□□ -1.84
YPT7	YML001W	MGR3	Q04472	501 aa		3.55	□□□□□ -1.84
YPT7	YML001W	APC4	Q04601	652 aa		3.55	□□□□□ -1.84
YPT7	YML001W	GPI11	Q06636	219 aa		3.55	□□□□□ -1.84
YPT7	YML001W	CYK3	Q07533	885 aa		3.55	□□□□□ -1.84
YPT7	YML001W	YOR387C	Q08910	206 aa		3.55	□□□□□ -1.84
YPT7	YML001W	RSA1	Q08932	381 aa		3.55	□□□□□ -1.84
YPT7	YML001W	RTK1	Q12100	620 aa	Predicted RBP	3.55	□□□□□ -1.84
YPT7	YML001W	MSH5	Q12175	901 aa		3.55	□□□□□ -1.84
YPT7	YML001W	AHA1	Q12449	350 aa	Known RBP	3.55	□□□□□ -1.84
YPT7	YML001W	MET17	P06106	444 aa		3.54	□□□□□ -1.84
YPT7	YML001W	ATP1	P07251	545 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	CBS2	P14905	389 aa		3.54	□□□□□ -1.84
YPT7	YML001W	DAL81	P21657	970 aa		3.54	□□□□□ -1.84
YPT7	YML001W	AAT2	P23542	418 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	CLB3	P24870	427 aa		3.54	□□□□□ -1.84
YPT7	YML001W	RPL5	P26321	297 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	RAD16	P31244	790 aa		3.54	□□□□□ -1.84
YPT7	YML001W	ARP2	P32381	391 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	ATP11	P32453	318 aa		3.54	□□□□□ -1.84
YPT7	YML001W	ATO2	P32907	282 aa		3.54	□□□□□ -1.84
YPT7	YML001W	ARC19	P33204	171 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	GDH2	P33327	1092 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	PRP18	P33411	251 aa	Predicted RBP	3.54	□□□□□ -1.84
YPT7	YML001W	NUF2	P33895	451 aa		3.54	□□□□□ -1.84
YPT7	YML001W	SKG1	P36169	355 aa		3.54	□□□□□ -1.84
YPT7	YML001W	HMT1	P38074	348 aa		3.54	□□□□□ -1.84
YPT7	YML001W	LDB7	P38210	180 aa		3.54	□□□□□ -1.84
YPT7	YML001W	RRF1	P38771	230 aa		3.54	□□□□□ -1.84
YPT7	YML001W	PCF11	P39081	626 aa	Predicted RBP	3.54	□□□□□ -1.84
YPT7	YML001W	MAD2	P40958	196 aa		3.54	□□□□□ -1.84
YPT7	YML001W	IAH1	P41734	238 aa		3.54	□□□□□ -1.84
YPT7	YML001W	GCD10	P41814	478 aa		3.54	□□□□□ -1.84
YPT7	YML001W	RBL2	P48606	106 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	YNL260C	P53846	198 aa		3.54	□□□□□ -1.84
YPT7	YML001W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
YPT7	YML001W	CIK1	Q01649	594 aa		3.54	□□□□□ -1.84
YPT7	YML001W	MMT1	Q03218	510 aa		3.54	□□□□□ -1.84
YPT7	YML001W	RSN1	Q03516	953 aa		3.54	□□□□□ -1.84
YPT7	YML001W	GAS3	Q03655	524 aa		3.54	□□□□□ -1.84
YPT7	YML001W	RAD30	Q04049	632 aa		3.54	□□□□□ -1.84
YPT7	YML001W	ATG38	Q05789	226 aa	Known RBP	3.54	□□□□□ -1.84
YPT7	YML001W	GGA1	Q06336	557 aa		3.54	□□□□□ -1.84
YPT7	YML001W	NDL1	Q06568	189 aa		3.54	□□□□□ -1.84
YPT7	YML001W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
YPT7	YML001W	GET4	Q12125	312 aa		3.54	□□□□□ -1.84
YPT7	YML001W	SCM3	Q12334	223 aa		3.54	□□□□□ -1.84
YPT7	YML001W	PFK27	Q12471	397 aa	Predicted RBP	3.54	□□□□□ -1.84
YPT7	YML001W	Q0010	Q9ZZX9	128 aa		3.54	□□□□□ -1.84
YPT7	YML001W	URA3	P03962	267 aa		3.53	□□□□□ -1.84
YPT7	YML001W	HXK2	P04807	486 aa	Known RBP	3.53	□□□□□ -1.84
YPT7	YML001W	RAD7	P06779	565 aa		3.53	□□□□□ -1.84
YPT7	YML001W	PUT2	P07275	575 aa		3.53	□□□□□ -1.84
YPT7	YML001W	RAP1	P11938	827 aa		3.53	□□□□□ -1.84
YPT7	YML001W	UNG1	P12887	359 aa		3.53	□□□□□ -1.84
YPT7	YML001W	MER1	P16523	270 aa		3.53	□□□□□ -1.84
YPT7	YML001W	UGA1	P17649	471 aa		3.53	□□□□□ -1.84
YPT7	YML001W	FAR1	P21268	830 aa		3.53	□□□□□ -1.84
YPT7	YML001W	MRPL8	P22353	238 aa		3.53	□□□□□ -1.84
YPT7	YML001W	CMK2	P22517	447 aa		3.53	□□□□□ -1.84
YPT7	YML001W	GRR1	P24814	1151 aa		3.53	□□□□□ -1.84
YPT7	YML001W	RER1	P25560	188 aa		3.53	□□□□□ -1.84
YPT7	YML001W	NUP2	P32499	720 aa		3.53	□□□□□ -1.84
YPT7	YML001W	NIC96	P34077	839 aa		3.53	□□□□□ -1.84
YPT7	YML001W	TPO5	P36029	618 aa		3.53	□□□□□ -1.84
YPT7	YML001W	STB6	P36085	766 aa		3.53	□□□□□ -1.84
YPT7	YML001W	NTR2	P36118	322 aa	Predicted RBP	3.53	□□□□□ -1.84
YPT7	YML001W	CAF4	P36130	643 aa		3.53	□□□□□ -1.84
YPT7	YML001W	PIM1	P36775	1133 aa		3.53	□□□□□ -1.84
YPT7	YML001W	ROT2	P38138	954 aa		3.53	□□□□□ -1.84
YPT7	YML001W	SLX1	P38324	304 aa		3.53	□□□□□ -1.84
YPT7	YML001W	GND1	P38720	489 aa	Known RBP	3.53	□□□□□ -1.84
YPT7	YML001W	LSM5	P40089	93 aa	Known RBP	3.53	□□□□□ -1.84
YPT7	YML001W	BTT1	P40314	149 aa	Predicted RBP	3.53	□□□□□ -1.84
YPT7	YML001W	SWP82	P43554	623 aa		3.53	□□□□□ -1.84
YPT7	YML001W	PTR3	P43606	678 aa		3.53	□□□□□ -1.84
YPT7	YML001W	SIP4	P46954	829 aa		3.53	□□□□□ -1.84
YPT7	YML001W	GCD14	P46959	383 aa	Predicted RBP	3.53	□□□□□ -1.84
YPT7	YML001W	EFM3	P47163	339 aa		3.53	□□□□□ -1.84
YPT7	YML001W	COS12	P53053	380 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms