RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	RPS10B	P46784	105 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	RPC17	P47076	161 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	KAP114	P53067	1004 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	DRN1	P53255	507 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	RHO5	P53879	331 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	TMA20	P89886	181 aa	Predicted RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	RPL6A	Q02326	176 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	SWP1	Q02795	286 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	CTL1	Q03220	320 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	YLR456W	Q06199	204 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	TEN1	Q07921	160 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	PML1	Q07930	204 aa	Predicted RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	RTC5	Q12108	567 aa	Known RBP	3.16	□□□□□ -1.9
RPN13	YLR421C	NBL1	Q3E7Y6	73 aa		3.16	□□□□□ -1.9
RPN13	YLR421C	REP1	P03871	373 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RHO2	P06781	192 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	PUT2	P07275	575 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RIP1	P08067	215 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	GCN3	P14741	305 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	SEC63	P14906	663 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	GLN3	P18494	730 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	SGV1	P23293	657 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	GAC1	P28006	793 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	FAA1	P30624	700 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	MIA40	P36046	403 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RPL32	P38061	130 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	ICS2	P38284	255 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	YBR242W	P38331	238 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	YDR089W	P38966	869 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	SMC2	P38989	1170 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	FCY21	P40039	528 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RTT105	P40063	208 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	AZF1	P41696	914 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	ALK1	P43633	760 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	YJR054W	P47114	497 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	PYK2	P52489	506 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	YGL108C	P53139	140 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	YGR266W	P53326	701 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	TOF2	Q02208	771 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	DML1	Q03652	475 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	GPI17	Q04080	534 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	YMR111C	Q04461	462 aa	Predicted RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	ALE1	Q08548	619 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RPN8	Q08723	338 aa	Known RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	YOR365C	Q08844	703 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	AEP3	Q12089	606 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	BUG1	Q12191	341 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	VAM3	Q12241	283 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	RUP1	Q12242	671 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	BBP1	Q12365	385 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	SFG1	Q12507	346 aa		3.15	□□□□□ -1.91
RPN13	YLR421C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.15	□□□□□ -1.91
RPN13	YLR421C	CMD1	P06787	147 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	RPC40	P07703	335 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	PEP5	P12868	1029 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	ARO3	P14843	370 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	ALG1	P16661	449 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	DAL80	P26343	269 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	NDI1	P32340	513 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	SAC1	P32368	623 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	HIR2	P32480	875 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	COY1	P34237	679 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	KDX1	P36005	433 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	STV1	P37296	890 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	ZTA1	P38230	334 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	MMS21	P38632	267 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	UBA4	P38820	440 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	WSS1	P38838	269 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	KEL1	P38853	1164 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	YHR210C	P38893	341 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	AST2	P39945	430 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	OSW5	P40219	148 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	YTA12	P40341	825 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	MKT1	P40850	830 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	ELP2	P42935	788 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	LOC1	P43586	204 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	PTR3	P43606	678 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	USE1	P53146	245 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	YNL143C	P53908	130 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	SRL4	Q03085	281 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	YMR130W	Q04223	302 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	EMI2	Q04409	500 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	COA4	Q05809	96 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	MSC3	Q05812	728 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	ADE13	Q05911	482 aa	Known RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	VPS54	Q12071	889 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	BRR1	Q99177	341 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN13	YLR421C	MTR10	Q99189	972 aa		3.14	□□□□□ -1.91
RPN13	YLR421C	CAR1	P00812	333 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	PDE2	P06776	526 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	SSC1	P0CS90	654 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	ATR1	P13090	542 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	POL30	P15873	258 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	HSP30	P25619	332 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	CRM1	P30822	1084 aa	Known RBP	3.13	□□□□□ -1.91
RPN13	YLR421C	ACH1	P32316	526 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	SHP1	P34223	423 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	TPO5	P36029	618 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	PFF1	P38244	976 aa		3.13	□□□□□ -1.91
RPN13	YLR421C	DBP8	P38719	431 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms