RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RNA1P11745 407 aaKnown RBP4.48□□□□□ -1.69
VPS36YLR417W DAL5P15365 543 aa4.48□□□□□ -1.69
VPS36YLR417W YCL068CP25593 260 aa4.48□□□□□ -1.69
VPS36YLR417W MSK1P32048 576 aa4.48□□□□□ -1.69
VPS36YLR417W HMX1P32339 317 aa4.48□□□□□ -1.69
VPS36YLR417W MRP4P32902 394 aa4.48□□□□□ -1.69
VPS36YLR417W YKL097CP34245 136 aa4.48□□□□□ -1.69
VPS36YLR417W PTK1P36002 662 aaPredicted RBP4.48□□□□□ -1.69
VPS36YLR417W PCL7P40186 285 aa4.48□□□□□ -1.69
VPS36YLR417W OST1P41543 476 aaKnown RBP4.48□□□□□ -1.69
VPS36YLR417W RAX1Q08760 435 aa4.48□□□□□ -1.69
VPS36YLR417W SNX3Q08826 162 aaKnown RBP4.48□□□□□ -1.69
VPS36YLR417W PDR10P51533 1564 aa4.48□□□□□ -1.69
VPS36YLR417W TPK3P05986 398 aa4.47□□□□□ -1.69
VPS36YLR417W MAS1P10507 462 aa4.47□□□□□ -1.69
VPS36YLR417W TOA2P32774 122 aa4.47□□□□□ -1.69
VPS36YLR417W PCH2P38126 564 aa4.47□□□□□ -1.69
VPS36YLR417W LIN1P38852 340 aaPredicted RBP4.47□□□□□ -1.69
VPS36YLR417W SNL1P40548 159 aa4.47□□□□□ -1.69
VPS36YLR417W YJL213WP40896 331 aa4.47□□□□□ -1.69
VPS36YLR417W SPG5P42933 373 aa4.47□□□□□ -1.69
VPS36YLR417W YDL186WP48568 277 aa4.47□□□□□ -1.69
VPS36YLR417W HXT11P54862 567 aa4.47□□□□□ -1.69
VPS36YLR417W SPR6Q01684 191 aa4.47□□□□□ -1.69
VPS36YLR417W YPR078CQ06813 372 aa4.47□□□□□ -1.69
VPS36YLR417W ASA1Q06822 443 aa4.47□□□□□ -1.69
VPS36YLR417W THP3Q12049 470 aaKnown RBP4.47□□□□□ -1.69
VPS36YLR417W YOR012WQ12351 137 aa4.47□□□□□ -1.69
VPS36YLR417W IRC20Q06554 1556 aa4.47□□□□□ -1.69
VPS36YLR417W CFT1Q06632 1357 aaKnown RBP4.47□□□□□ -1.69
VPS36YLR417W VPS15P22219 1454 aa4.47□□□□□ -1.69
VPS36YLR417W CPR1P14832 162 aaKnown RBP4.46□□□□□ -1.69
VPS36YLR417W CHK1P38147 527 aa4.46□□□□□ -1.69
VPS36YLR417W TOS2P50078 622 aa4.46□□□□□ -1.69
VPS36YLR417W MSO1P53604 210 aaKnown RBP4.46□□□□□ -1.69
VPS36YLR417W CRZ1P53968 678 aa4.46□□□□□ -1.69
VPS36YLR417W CCE1Q03702 353 aa4.46□□□□□ -1.69
VPS36YLR417W VPS20Q04272 221 aa4.46□□□□□ -1.69
VPS36YLR417W YOP1Q12402 180 aa4.46□□□□□ -1.69
VPS36YLR417W PDR15Q04182 1529 aaKnown RBP4.46□□□□□ -1.7
VPS36YLR417W CAT8P39113 1433 aa4.46□□□□□ -1.7
VPS36YLR417W PAB1P04147 577 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
VPS36YLR417W YEF1P32622 495 aa4.46□□□□□ -1.7
VPS36YLR417W YBR137WP38276 179 aa4.46□□□□□ -1.7
VPS36YLR417W YHR122WP38829 231 aa4.46□□□□□ -1.7
VPS36YLR417W MTC6P38849 526 aa4.46□□□□□ -1.7
VPS36YLR417W JLP2P40206 208 aa4.46□□□□□ -1.7
VPS36YLR417W MEP1P40260 492 aa4.46□□□□□ -1.7
VPS36YLR417W RRN9P53437 365 aa4.46□□□□□ -1.7
VPS36YLR417W GOR1P53839 350 aa4.46□□□□□ -1.7
VPS36YLR417W POM152P39685 1337 aa4.45□□□□□ -1.7
VPS36YLR417W MAS2P11914 482 aa4.45□□□□□ -1.7
VPS36YLR417W HEM15P16622 393 aa4.45□□□□□ -1.7
VPS36YLR417W PRO3P32263 286 aaKnown RBP4.45□□□□□ -1.7
VPS36YLR417W EFB1P32471 206 aaKnown RBP4.45□□□□□ -1.7
VPS36YLR417W MUD1P32605 298 aaKnown RBP4.45□□□□□ -1.7
VPS36YLR417W LCP5P40079 357 aaPredicted RBP4.45□□□□□ -1.7
VPS36YLR417W LYS12P40495 371 aaKnown RBP4.45□□□□□ -1.7
VPS36YLR417W IDP2P41939 412 aa4.45□□□□□ -1.7
VPS36YLR417W RRP46P53256 223 aaPredicted RBP4.45□□□□□ -1.7
VPS36YLR417W WSC2P53832 503 aa4.45□□□□□ -1.7
VPS36YLR417W ICT1Q12385 394 aa4.45□□□□□ -1.7
VPS36YLR417W FSH3Q99369 266 aa4.45□□□□□ -1.7
VPS36YLR417W CBP2P03874 630 aaPredicted RBP4.44□□□□□ -1.7
VPS36YLR417W GDH1P07262 454 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W RNR2P09938 399 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W CAP2P13517 287 aa4.44□□□□□ -1.7
VPS36YLR417W EXG1P23776 448 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W DBR1P24309 405 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W GRR1P24814 1151 aa4.44□□□□□ -1.7
VPS36YLR417W TMT1P32643 299 aa4.44□□□□□ -1.7
VPS36YLR417W MCR1P36060 302 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W NDE2Q07500 545 aa4.44□□□□□ -1.7
VPS36YLR417W YLR108CQ12259 485 aa4.44□□□□□ -1.7
VPS36YLR417W YCF1P39109 1515 aaKnown RBP4.44□□□□□ -1.7
VPS36YLR417W MRPL8P22353 238 aa4.43□□□□□ -1.7
VPS36YLR417W HXT2P23585 541 aa4.43□□□□□ -1.7
VPS36YLR417W DAL80P26343 269 aa4.43□□□□□ -1.7
VPS36YLR417W SSO2P39926 295 aa4.43□□□□□ -1.7
VPS36YLR417W YFL067WP43537 175 aa4.43□□□□□ -1.7
VPS36YLR417W ARP5P53946 755 aa4.43□□□□□ -1.7
VPS36YLR417W HNT3Q08702 217 aa4.43□□□□□ -1.7
VPS36YLR417W PPT2Q12036 173 aa4.43□□□□□ -1.7
VPS36YLR417W GLE1Q12315 538 aa4.43□□□□□ -1.7
VPS36YLR417W AIM45Q12480 344 aaKnown RBP4.43□□□□□ -1.7
VPS36YLR417W KOG1P38873 1557 aa4.43□□□□□ -1.7
VPS36YLR417W CDC37P06101 506 aaKnown RBP4.43□□□□□ -1.7
VPS36YLR417W SSC1P0CS90 654 aaKnown RBP4.43□□□□□ -1.7
VPS36YLR417W CLN3P13365 580 aa4.43□□□□□ -1.7
VPS36YLR417W YBR139WP38109 508 aa4.43□□□□□ -1.7
VPS36YLR417W GCD2P12754 651 aaPredicted RBP4.42□□□□□ -1.7
VPS36YLR417W PET18P25362 215 aa4.42□□□□□ -1.7
VPS36YLR417W TIF5P38431 405 aaKnown RBP4.42□□□□□ -1.7
VPS36YLR417W YGL114WP53134 725 aa4.42□□□□□ -1.7
VPS36YLR417W YNL146WP53906 100 aa4.42□□□□□ -1.7
VPS36YLR417W ERV25P54837 211 aaKnown RBP4.42□□□□□ -1.7
VPS36YLR417W ABZ2Q03266 374 aa4.42□□□□□ -1.7
VPS36YLR417W AIM33Q04516 312 aa4.42□□□□□ -1.7
VPS36YLR417W YMR317WQ04893 1140 aa4.42□□□□□ -1.7
VPS36YLR417W RTT103Q05543 409 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms