RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W SSC1P0CS90 654 aaKnown RBP2.96□□□□□ -1.94
YLR400WYLR400W PUT4P15380 627 aa2.96□□□□□ -1.94
YLR400WYLR400W SAM2P19358 384 aaKnown RBP2.96□□□□□ -1.94
YLR400WYLR400W ZUO1P32527 433 aaKnown RBP2.96□□□□□ -1.94
YLR400WYLR400W TRS65P32893 560 aa2.96□□□□□ -1.94
YLR400WYLR400W VAM7P32912 316 aa2.96□□□□□ -1.94
YLR400WYLR400W PMU1P36069 295 aa2.96□□□□□ -1.94
YLR400WYLR400W YBR056WP38081 501 aa2.96□□□□□ -1.94
YLR400WYLR400W YHR131CP38835 850 aa2.96□□□□□ -1.94
YLR400WYLR400W FAA2P39518 744 aa2.96□□□□□ -1.94
YLR400WYLR400W YMR134WP40207 237 aa2.96□□□□□ -1.94
YLR400WYLR400W ALG8P40351 577 aa2.96□□□□□ -1.94
YLR400WYLR400W ATM1P40416 690 aa2.96□□□□□ -1.94
YLR400WYLR400W YFR016CP43597 1233 aaKnown RBP2.96□□□□□ -1.94
YLR400WYLR400W YHC3P47040 408 aa2.96□□□□□ -1.94
YLR400WYLR400W RTT101P47050 842 aa2.96□□□□□ -1.94
YLR400WYLR400W SSN8P47821 323 aa2.96□□□□□ -1.94
YLR400WYLR400W AZR1P50080 613 aa2.96□□□□□ -1.94
YLR400WYLR400W RIB4P50861 169 aaPredicted RBP2.96□□□□□ -1.94
YLR400WYLR400W YGL114WP53134 725 aa2.96□□□□□ -1.94
YLR400WYLR400W YGR117CP53270 476 aa2.96□□□□□ -1.94
YLR400WYLR400W DBP6P53734 629 aaKnown RBP2.96□□□□□ -1.94
YLR400WYLR400W ALF1P53904 254 aa2.96□□□□□ -1.94
YLR400WYLR400W HXT11P54862 567 aa2.96□□□□□ -1.94
YLR400WYLR400W PIR3Q03180 325 aa2.96□□□□□ -1.94
YLR400WYLR400W YDR415CQ04033 374 aaPredicted RBP2.96□□□□□ -1.94
YLR400WYLR400W YDR262WQ12331 272 aa2.96□□□□□ -1.94
YLR400WYLR400W NCA2Q12374 616 aa2.96□□□□□ -1.94
YLR400WYLR400W SPO24Q3E752 67 aa2.96□□□□□ -1.94
YLR400WYLR400W PAB1P04147 577 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
YLR400WYLR400W SUP35P05453 685 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W ATP1P07251 545 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W ATR1P13090 542 aa2.95□□□□□ -1.94
YLR400WYLR400W CKI1P20485 582 aa2.95□□□□□ -1.94
YLR400WYLR400W FAR1P21268 830 aa2.95□□□□□ -1.94
YLR400WYLR400W EXG1P23776 448 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W PUT3P25502 979 aaPredicted RBP2.95□□□□□ -1.94
YLR400WYLR400W EFB1P32471 206 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W PTR2P32901 601 aa2.95□□□□□ -1.94
YLR400WYLR400W SKT5P34226 696 aa2.95□□□□□ -1.94
YLR400WYLR400W DOA1P36037 715 aa2.95□□□□□ -1.94
YLR400WYLR400W SWC5P38326 303 aa2.95□□□□□ -1.94
YLR400WYLR400W VPS45P38932 577 aa2.95□□□□□ -1.94
YLR400WYLR400W PRP39P39682 629 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W LYS12P40495 371 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W SNL1P40548 159 aa2.95□□□□□ -1.94
YLR400WYLR400W CDC40P40968 455 aaPredicted RBP2.95□□□□□ -1.94
YLR400WYLR400W SFH5P47008 294 aa2.95□□□□□ -1.94
YLR400WYLR400W COS10P52924 374 aa2.95□□□□□ -1.94
YLR400WYLR400W SPO19Q03029 223 aa2.95□□□□□ -1.94
YLR400WYLR400W YMR181CQ03231 154 aa2.95□□□□□ -1.94
YLR400WYLR400W CAB5Q03941 241 aa2.95□□□□□ -1.94
YLR400WYLR400W BCH1Q05029 724 aa2.95□□□□□ -1.94
YLR400WYLR400W YLR297WQ05899 129 aa2.95□□□□□ -1.94
YLR400WYLR400W YLR413WQ06689 675 aa2.95□□□□□ -1.94
YLR400WYLR400W RAX1Q08760 435 aa2.95□□□□□ -1.94
YLR400WYLR400W YOP1Q12402 180 aa2.95□□□□□ -1.94
YLR400WYLR400W RRP12Q12754 1228 aaKnown RBP2.95□□□□□ -1.94
YLR400WYLR400W TPK3P05986 398 aa2.94□□□□□ -1.94
YLR400WYLR400W GAL7P08431 366 aa2.94□□□□□ -1.94
YLR400WYLR400W CAP2P13517 287 aa2.94□□□□□ -1.94
YLR400WYLR400W MTF1P14908 341 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W SLY1P22213 666 aa2.94□□□□□ -1.94
YLR400WYLR400W YCL068CP25593 260 aa2.94□□□□□ -1.94
YLR400WYLR400W YEF1P32622 495 aa2.94□□□□□ -1.94
YLR400WYLR400W KKQ8P36004 724 aa2.94□□□□□ -1.94
YLR400WYLR400W MCR1P36060 302 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W GPX2P38143 162 aa2.94□□□□□ -1.94
YLR400WYLR400W MIX23P38162 196 aa2.94□□□□□ -1.94
YLR400WYLR400W PEX32P38292 413 aa2.94□□□□□ -1.94
YLR400WYLR400W DED81P38707 554 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W END3P39013 349 aa2.94□□□□□ -1.94
YLR400WYLR400W JLP2P40206 208 aa2.94□□□□□ -1.94
YLR400WYLR400W PNC1P53184 216 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W YNL146WP53906 100 aa2.94□□□□□ -1.94
YLR400WYLR400W GRX3Q03835 250 aa2.94□□□□□ -1.94
YLR400WYLR400W RRG8Q06109 277 aa2.94□□□□□ -1.94
YLR400WYLR400W ARR1Q06596 294 aa2.94□□□□□ -1.94
YLR400WYLR400W VAC14Q06708 880 aa2.94□□□□□ -1.94
YLR400WYLR400W RLP24Q07915 199 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W MUM3Q08750 479 aa2.94□□□□□ -1.94
YLR400WYLR400W YPL199CQ08954 240 aa2.94□□□□□ -1.94
YLR400WYLR400W PAA1Q12447 191 aaKnown RBP2.94□□□□□ -1.94
YLR400WYLR400W MRPL23Q12487 163 aaPredicted RBP2.94□□□□□ -1.94
YLR400WYLR400W YIL002W-AQ3E7Z5 69 aa2.94□□□□□ -1.94
YLR400WYLR400W YOR338WQ99326 363 aa2.94□□□□□ -1.94
YLR400WYLR400W RPL20AP0CX23 172 aaKnown RBP2.93□□□□□ -1.94
YLR400WYLR400W RPL20BP0CX24 172 aaPredicted RBP2.93□□□□□ -1.94
YLR400WYLR400W CLN3P13365 580 aa2.93□□□□□ -1.94
YLR400WYLR400W UGA1P17649 471 aa2.93□□□□□ -1.94
YLR400WYLR400W MXR2P25566 168 aa2.93□□□□□ -1.94
YLR400WYLR400W PRO3P32263 286 aaKnown RBP2.93□□□□□ -1.94
YLR400WYLR400W YPS1P32329 569 aa2.93□□□□□ -1.94
YLR400WYLR400W PHA2P32452 334 aa2.93□□□□□ -1.94
YLR400WYLR400W COX13P32799 129 aa2.93□□□□□ -1.94
YLR400WYLR400W BUD2P33314 1104 aa2.93□□□□□ -1.94
YLR400WYLR400W MRPS5P33759 307 aa2.93□□□□□ -1.94
YLR400WYLR400W OST1P41543 476 aaKnown RBP2.93□□□□□ -1.94
YLR400WYLR400W YGL185CP53100 379 aa2.93□□□□□ -1.94
YLR400WYLR400W CAF40P53829 373 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms