RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	DED81	P38707	554 aa	Known RBP	5.44	□□□□□ -1.54
DBP9	YLR276C	LYS9	P38999	446 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	GIP4	P39732	760 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	CHA4	P43634	648 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	PRY1	P47032	299 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YJL043W	P47053	257 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	ABM1	P47146	123 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	RPS7B	P48164	190 aa	Known RBP	5.44	□□□□□ -1.54
DBP9	YLR276C	CUL3	P53202	744 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	SPC98	P53540	846 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	RET3	P53600	189 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	INN1	P53901	409 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YNL146W	P53906	100 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	OCA2	P53949	197 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	STP1	Q00947	519 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	TVP15	Q03860	143 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YDR387C	Q04162	555 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	CUE5	Q08412	411 aa	Known RBP	5.44	□□□□□ -1.54
DBP9	YLR276C	TGL5	Q12043	749 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YBR085C-A	O43137	85 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	UGA1	P17649	471 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	NAM9	P27929	486 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	SCM4	P32564	187 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	ALY1	P36117	915 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	MRPL3	P36516	390 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	RIM2	P38127	377 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YBL029W	P38201	376 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	TOS1	P38288	455 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	KSP1	P38691	1029 aa	Known RBP	5.44	□□□□□ -1.54
DBP9	YLR276C	GND1	P38720	489 aa	Known RBP	5.44	□□□□□ -1.54
DBP9	YLR276C	YIR035C	P40579	254 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	FAR3	P46671	204 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	DOC1	P53068	250 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YGL138C	P53122	345 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	MRH4	P53166	561 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	VPS62	P53285	467 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	RSM27	P53305	110 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	PLB2	Q03674	706 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	UFO1	Q04511	668 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	SWF1	Q04629	336 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	YET3	Q07451	203 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	AAD15	Q08361	143 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	RPN6	Q12377	434 aa		5.44	□□□□□ -1.54
DBP9	YLR276C	CET1	O13297	549 aa	Predicted RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	LEU4	P06208	619 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	HIS5	P07172	385 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	MAS1	P10507	462 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	PET54	P10834	293 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	APE1	P14904	514 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	DAL81	P21657	970 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	RPL24B	P24000	155 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	MNE1	P24720	663 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	STE50	P25344	346 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	DMC1	P25453	334 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	APE2	P32454	952 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	FRE1	P32791	686 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	PTM1	P32857	523 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	RGT1	P32862	1170 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	SUI1	P32911	108 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	SRB2	P34162	210 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	GCS1	P35197	352 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	ELF1	P36053	145 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	CAF4	P36130	643 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	MLH1	P38920	769 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	RGI2	P40188	164 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	LRO1	P40345	661 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	YIL054W	P40524	105 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	IRC24	P40580	263 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	SER2	P42941	309 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	GNA1	P43577	159 aa	Predicted RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	AIM23	P47015	356 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	TOM22	P49334	152 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	HHO1	P53551	258 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
DBP9	YLR276C	YNL010W	P53981	241 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	YPL108W	Q02872	168 aa	Predicted RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	APC4	Q04601	652 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	STP3	Q05937	343 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	SLF1	Q12034	447 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	PAR32	Q12515	295 aa	Known RBP	5.43	□□□□□ -1.54
DBP9	YLR276C	SAS5	Q99314	248 aa		5.43	□□□□□ -1.54
DBP9	YLR276C	CTT1	P06115	562 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	GCD1	P09032	578 aa	Predicted RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	LDS1	P31379	325 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	NDC1	P32500	655 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	MDL1	P33310	695 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	PGM1	P33401	570 aa	Known RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	ECM8	P38246	354 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	RPP1	P38786	293 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	MET28	P40573	187 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	GPI1	P53306	609 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	SLD7	Q08457	257 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	ESA1	Q08649	445 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	FMP40	Q08968	688 aa	Predicted RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	YOR283W	Q12040	230 aa	Known RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	ISN1	Q99312	450 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	MOT1	P32333	1867 aa		5.42	□□□□□ -1.54
DBP9	YLR276C	RPS18A	P0CX55	146 aa	Known RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	RPS18B	P0CX56	146 aa	Predicted RBP	5.42	□□□□□ -1.54
DBP9	YLR276C	UBC8	P28263	218 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms