RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W CPR4P25334 318 aa1.28□□□□□ -2.2
SLX4YLR135W ARO2P28777 376 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W MSK1P32048 576 aa1.28□□□□□ -2.2
SLX4YLR135W HMX1P32339 317 aa1.28□□□□□ -2.2
SLX4YLR135W EFB1P32471 206 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W SRB2P34162 210 aa1.28□□□□□ -2.2
SLX4YLR135W COX14P39103 70 aa1.28□□□□□ -2.2
SLX4YLR135W YIL089WP40500 205 aa1.28□□□□□ -2.2
SLX4YLR135W SPG5P42933 373 aa1.28□□□□□ -2.2
SLX4YLR135W YFL067WP43537 175 aa1.28□□□□□ -2.2
SLX4YLR135W WSC2P53832 503 aa1.28□□□□□ -2.2
SLX4YLR135W BOR1P53838 576 aa1.28□□□□□ -2.2
SLX4YLR135W CCE1Q03702 353 aa1.28□□□□□ -2.2
SLX4YLR135W ASA1Q06822 443 aa1.28□□□□□ -2.2
SLX4YLR135W LOT6Q07923 191 aa1.28□□□□□ -2.2
SLX4YLR135W TLG2Q08144 397 aa1.28□□□□□ -2.2
SLX4YLR135W PEX27Q08580 376 aa1.28□□□□□ -2.2
SLX4YLR135W YOP1Q12402 180 aa1.28□□□□□ -2.2
SLX4YLR135W AIM45Q12480 344 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W TRP1P00912 224 aa1.28□□□□□ -2.2
SLX4YLR135W PHO2P07269 559 aa1.28□□□□□ -2.2
SLX4YLR135W MAS1P10507 462 aa1.28□□□□□ -2.2
SLX4YLR135W CPR3P25719 182 aa1.28□□□□□ -2.2
SLX4YLR135W YBR139WP38109 508 aa1.28□□□□□ -2.2
SLX4YLR135W GPX2P38143 162 aa1.28□□□□□ -2.2
SLX4YLR135W RRF1P38771 230 aa1.28□□□□□ -2.2
SLX4YLR135W LIN1P38852 340 aaPredicted RBP1.28□□□□□ -2.2
SLX4YLR135W YHR218WP38899 603 aa1.28□□□□□ -2.2
SLX4YLR135W YDR089WP38966 869 aa1.28□□□□□ -2.2
SLX4YLR135W YMR134WP40207 237 aa1.28□□□□□ -2.2
SLX4YLR135W LYS12P40495 371 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W YIL067CP40514 678 aa1.28□□□□□ -2.2
SLX4YLR135W YGL260WP53056 76 aa1.28□□□□□ -2.2
SLX4YLR135W GOR1P53839 350 aa1.28□□□□□ -2.2
SLX4YLR135W IMP4P53941 290 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W ADA2Q02336 434 aa1.28□□□□□ -2.2
SLX4YLR135W SMA2Q04658 369 aa1.28□□□□□ -2.2
SLX4YLR135W TSR1Q07381 788 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W FDH1Q08911 376 aa1.28□□□□□ -2.2
SLX4YLR135W RTC5Q12108 567 aaKnown RBP1.28□□□□□ -2.2
SLX4YLR135W TIP41Q12199 356 aa1.28□□□□□ -2.2
SLX4YLR135W HHF1P02309 103 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W CYC3P06182 269 aa1.27□□□□□ -2.21
SLX4YLR135W STE3P06783 470 aa1.27□□□□□ -2.21
SLX4YLR135W SSC1P0CS90 654 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W RPS16AP0CX51 143 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W RPS16BP0CX52 143 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W RPB5P20434 215 aa1.27□□□□□ -2.21
SLX4YLR135W SAG1P20840 650 aa1.27□□□□□ -2.21
SLX4YLR135W DBR1P24309 405 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W PCH2P38126 564 aa1.27□□□□□ -2.21
SLX4YLR135W SBE22P38814 852 aa1.27□□□□□ -2.21
SLX4YLR135W KRE9P39005 276 aa1.27□□□□□ -2.21
SLX4YLR135W SEC9P40357 651 aa1.27□□□□□ -2.21
SLX4YLR135W LOC1P43586 204 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W NCA3P46955 337 aa1.27□□□□□ -2.21
SLX4YLR135W RRP46P53256 223 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W MTM1P53320 366 aa1.27□□□□□ -2.21
SLX4YLR135W SPR6Q01684 191 aa1.27□□□□□ -2.21
SLX4YLR135W ELP3Q02908 557 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W VPS20Q04272 221 aa1.27□□□□□ -2.21
SLX4YLR135W PRM6Q04705 352 aa1.27□□□□□ -2.21
SLX4YLR135W YMR310CQ04867 317 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W PBA1Q05778 276 aa1.27□□□□□ -2.21
SLX4YLR135W YDL114WQ07530 308 aa1.27□□□□□ -2.21
SLX4YLR135W STF1P01098 86 aa1.27□□□□□ -2.21
SLX4YLR135W CLN3P13365 580 aa1.27□□□□□ -2.21
SLX4YLR135W PET18P25362 215 aa1.27□□□□□ -2.21
SLX4YLR135W POP5P28005 173 aa1.27□□□□□ -2.21
SLX4YLR135W FUN26P31381 517 aa1.27□□□□□ -2.21
SLX4YLR135W DPH5P32469 300 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W SUR1P33300 382 aa1.27□□□□□ -2.21
SLX4YLR135W YBL059WP34224 193 aa1.27□□□□□ -2.21
SLX4YLR135W YHK8P38776 514 aa1.27□□□□□ -2.21
SLX4YLR135W SSO2P39926 295 aa1.27□□□□□ -2.21
SLX4YLR135W YGR210CP42942 411 aa1.27□□□□□ -2.21
SLX4YLR135W ABM1P47146 123 aa1.27□□□□□ -2.21
SLX4YLR135W YGL242CP53066 181 aa1.27□□□□□ -2.21
SLX4YLR135W MRM2P53123 320 aa1.27□□□□□ -2.21
SLX4YLR135W CWC25P53854 179 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W YTH1Q06102 208 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W SPH1Q06160 661 aa1.27□□□□□ -2.21
SLX4YLR135W CMS1Q07897 291 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W YGK3Q12222 375 aaPredicted RBP1.27□□□□□ -2.21
SLX4YLR135W HIF1Q12373 385 aa1.27□□□□□ -2.21
SLX4YLR135W MEX67Q99257 599 aaKnown RBP1.27□□□□□ -2.21
SLX4YLR135W FSH3Q99369 266 aa1.27□□□□□ -2.21
SLX4YLR135W PIS1P06197 220 aaKnown RBP1.26□□□□□ -2.21
SLX4YLR135W RNR2P09938 399 aaKnown RBP1.26□□□□□ -2.21
SLX4YLR135W CBS2P14905 389 aa1.26□□□□□ -2.21
SLX4YLR135W MSS116P15424 664 aaKnown RBP1.26□□□□□ -2.21
SLX4YLR135W FAR1P21268 830 aa1.26□□□□□ -2.21
SLX4YLR135W SSE1P32589 693 aaKnown RBP1.26□□□□□ -2.21
SLX4YLR135W RAD5P32849 1169 aaPredicted RBP1.26□□□□□ -2.21
SLX4YLR135W MNS1P32906 549 aa1.26□□□□□ -2.21
SLX4YLR135W PAD1P33751 242 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
SLX4YLR135W AVT5P38176 459 aa1.26□□□□□ -2.21
SLX4YLR135W RFS1P38234 210 aaKnown RBP1.26□□□□□ -2.21
SLX4YLR135W PEX32P38292 413 aa1.26□□□□□ -2.21
SLX4YLR135W PTH1P38876 190 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms