RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W PHO86P46956 311 aa2.35□□□□□ -2.03
SDC25YLL016W BUD32P53323 261 aa2.35□□□□□ -2.03
SDC25YLL016W PGA2P53903 129 aa2.35□□□□□ -2.03
SDC25YLL016W YDR387CQ04162 555 aa2.35□□□□□ -2.03
SDC25YLL016W SMP3Q04174 516 aa2.35□□□□□ -2.03
SDC25YLL016W HSP31Q04432 237 aa2.35□□□□□ -2.03
SDC25YLL016W GTO3Q04806 366 aa2.35□□□□□ -2.03
SDC25YLL016W ATG26Q06321 1198 aa2.35□□□□□ -2.03
SDC25YLL016W SHS1Q07657 551 aa2.35□□□□□ -2.03
SDC25YLL016W REX4Q08237 289 aa2.35□□□□□ -2.03
SDC25YLL016W BSC6Q08280 497 aa2.35□□□□□ -2.03
SDC25YLL016W RPP0P05317 312 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W OPI3P05375 206 aa2.34□□□□□ -2.03
SDC25YLL016W CDC36P06100 191 aaPredicted RBP2.34□□□□□ -2.03
SDC25YLL016W RAD7P06779 565 aa2.34□□□□□ -2.03
SDC25YLL016W CHS1P08004 1131 aa2.34□□□□□ -2.03
SDC25YLL016W RPL18AP0CX49 186 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W RPL18BP0CX50 186 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W KRS1P15180 591 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W NUP1P20676 1076 aa2.34□□□□□ -2.03
SDC25YLL016W KRE6P32486 720 aa2.34□□□□□ -2.03
SDC25YLL016W MGM101P32787 269 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
SDC25YLL016W MSN2P33748 704 aa2.34□□□□□ -2.03
SDC25YLL016W SYG1P40528 902 aa2.34□□□□□ -2.03
SDC25YLL016W SPG5P42933 373 aa2.34□□□□□ -2.03
SDC25YLL016W YJL118WP47022 219 aa2.34□□□□□ -2.03
SDC25YLL016W LOH1P47055 219 aa2.34□□□□□ -2.03
SDC25YLL016W YJR011CP47086 261 aaPredicted RBP2.34□□□□□ -2.03
SDC25YLL016W RAD17P48581 401 aa2.34□□□□□ -2.03
SDC25YLL016W YMR206WQ03695 313 aa2.34□□□□□ -2.03
SDC25YLL016W SNU56Q03782 492 aaKnown RBP2.34□□□□□ -2.03
SDC25YLL016W URC2Q04411 772 aa2.34□□□□□ -2.03
SDC25YLL016W COQ11Q05892 277 aa2.34□□□□□ -2.03
SDC25YLL016W DNL4Q08387 944 aaPredicted RBP2.34□□□□□ -2.03
SDC25YLL016W RUP1Q12242 671 aa2.34□□□□□ -2.03
SDC25YLL016W RAD52P06778 471 aaKnown RBP2.34□□□□□ -2.04
SDC25YLL016W PPR1P07272 904 aaPredicted RBP2.34□□□□□ -2.04
SDC25YLL016W KSS1P14681 368 aa2.34□□□□□ -2.04
SDC25YLL016W FUS3P16892 353 aaKnown RBP2.34□□□□□ -2.04
SDC25YLL016W FUN19P28003 413 aaPredicted RBP2.34□□□□□ -2.04
SDC25YLL016W HRR25P29295 494 aaKnown RBP2.34□□□□□ -2.04
SDC25YLL016W MSK1P32048 576 aa2.34□□□□□ -2.04
SDC25YLL016W TOD6P34219 525 aa2.34□□□□□ -2.04
SDC25YLL016W MIA40P36046 403 aa2.34□□□□□ -2.04
SDC25YLL016W TAE1P38340 232 aa2.34□□□□□ -2.04
SDC25YLL016W PET100P38958 111 aa2.34□□□□□ -2.04
SDC25YLL016W FET3P38993 636 aa2.34□□□□□ -2.04
SDC25YLL016W DSE1P40077 573 aa2.34□□□□□ -2.04
SDC25YLL016W SAS2P40963 338 aa2.34□□□□□ -2.04
SDC25YLL016W LOC1P43586 204 aaPredicted RBP2.34□□□□□ -2.04
SDC25YLL016W YJL043WP47053 257 aa2.34□□□□□ -2.04
SDC25YLL016W MNN10P50108 393 aaKnown RBP2.34□□□□□ -2.04
SDC25YLL016W YGR168CP53293 376 aa2.34□□□□□ -2.04
SDC25YLL016W SOL4P53315 255 aa2.34□□□□□ -2.04
SDC25YLL016W IRC10Q08118 586 aa2.34□□□□□ -2.04
SDC25YLL016W FSH3Q99369 266 aa2.34□□□□□ -2.04
SDC25YLL016W ADE5,7P07244 802 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W POX1P13711 748 aa2.33□□□□□ -2.04
SDC25YLL016W CDC23P16522 626 aa2.33□□□□□ -2.04
SDC25YLL016W ARO4P32449 370 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W HXT1P32465 570 aa2.33□□□□□ -2.04
SDC25YLL016W CYM1P32898 989 aa2.33□□□□□ -2.04
SDC25YLL016W TSA1P34760 196 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W YKR015CP36111 568 aa2.33□□□□□ -2.04
SDC25YLL016W SLX1P38324 304 aa2.33□□□□□ -2.04
SDC25YLL016W RTT107P38850 1070 aa2.33□□□□□ -2.04
SDC25YLL016W YER085CP40058 173 aa2.33□□□□□ -2.04
SDC25YLL016W MMF1P40185 145 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W MSS2P40990 351 aa2.33□□□□□ -2.04
SDC25YLL016W TRF5P48561 642 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W CPR8P53728 308 aa2.33□□□□□ -2.04
SDC25YLL016W YDR262WQ12331 272 aa2.33□□□□□ -2.04
SDC25YLL016W PAA1Q12447 191 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W VPS13Q07878 3144 aa2.33□□□□□ -2.04
SDC25YLL016W RIF1P29539 1916 aa2.33□□□□□ -2.04
SDC25YLL016W RPB8P20436 146 aa2.33□□□□□ -2.04
SDC25YLL016W STE11P23561 717 aa2.33□□□□□ -2.04
SDC25YLL016W DBR1P24309 405 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W RME1P32338 300 aaKnown RBP2.33□□□□□ -2.04
SDC25YLL016W IMP3P32899 183 aaPredicted RBP2.33□□□□□ -2.04
SDC25YLL016W RPC37P36121 282 aa2.33□□□□□ -2.04
SDC25YLL016W YBR056WP38081 501 aa2.33□□□□□ -2.04
SDC25YLL016W STP2P38704 541 aa2.33□□□□□ -2.04
SDC25YLL016W VRG4P40107 337 aa2.33□□□□□ -2.04
SDC25YLL016W BUL1P48524 976 aa2.33□□□□□ -2.04
SDC25YLL016W TIM21P53220 239 aa2.33□□□□□ -2.04
SDC25YLL016W YMR087WQ04299 284 aa2.33□□□□□ -2.04
SDC25YLL016W AIM33Q04516 312 aa2.33□□□□□ -2.04
SDC25YLL016W CTS2Q06350 511 aa2.33□□□□□ -2.04
SDC25YLL016W ARG4P04076 463 aaPredicted RBP2.33□□□□□ -2.04
SDC25YLL016W CLN3P13365 580 aa2.33□□□□□ -2.04
SDC25YLL016W DAL81P21657 970 aa2.33□□□□□ -2.04
SDC25YLL016W CNA1P23287 553 aa2.33□□□□□ -2.04
SDC25YLL016W GPI12P23797 304 aa2.33□□□□□ -2.04
SDC25YLL016W ASF2P32448 525 aaPredicted RBP2.33□□□□□ -2.04
SDC25YLL016W DOA1P36037 715 aa2.33□□□□□ -2.04
SDC25YLL016W MAL32P38158 584 aa2.33□□□□□ -2.04
SDC25YLL016W BDH2P39713 417 aa2.33□□□□□ -2.04
SDC25YLL016W HMS2P47175 358 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms