RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C ARR1Q06596 294 aa2.06□□□□□ -2.08
UBP11YKR098C FSH3Q99369 266 aa2.06□□□□□ -2.08
UBP11YKR098C POM152P39685 1337 aa2.05□□□□□ -2.08
UBP11YKR098C PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
UBP11YKR098C CDC37P06101 506 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C MAS2P11914 482 aa2.05□□□□□ -2.08
UBP11YKR098C GAL3P13045 520 aa2.05□□□□□ -2.08
UBP11YKR098C CPR1P14832 162 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C PHA2P32452 334 aa2.05□□□□□ -2.08
UBP11YKR098C MCR1P36060 302 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C GPX2P38143 162 aa2.05□□□□□ -2.08
UBP11YKR098C CHK1P38147 527 aa2.05□□□□□ -2.08
UBP11YKR098C ALP1P38971 573 aa2.05□□□□□ -2.08
UBP11YKR098C LYS12P40495 371 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C WSC2P53832 503 aa2.05□□□□□ -2.08
UBP11YKR098C AIM33Q04516 312 aa2.05□□□□□ -2.08
UBP11YKR098C GRS2Q06817 618 aa2.05□□□□□ -2.08
UBP11YKR098C AFT2Q08957 416 aa2.05□□□□□ -2.08
UBP11YKR098C YOR338WQ99326 363 aa2.05□□□□□ -2.08
UBP11YKR098C RNR2P09938 399 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C GCD2P12754 651 aaPredicted RBP2.05□□□□□ -2.08
UBP11YKR098C CLN3P13365 580 aa2.05□□□□□ -2.08
UBP11YKR098C HEM15P16622 393 aa2.05□□□□□ -2.08
UBP11YKR098C PET18P25362 215 aa2.05□□□□□ -2.08
UBP11YKR098C MRP4P32902 394 aa2.05□□□□□ -2.08
UBP11YKR098C PPQ1P32945 549 aa2.05□□□□□ -2.08
UBP11YKR098C MRPL40P36534 297 aa2.05□□□□□ -2.08
UBP11YKR098C MTC6P38849 526 aa2.05□□□□□ -2.08
UBP11YKR098C RTT105P40063 208 aa2.05□□□□□ -2.08
UBP11YKR098C AIM20P40451 204 aa2.05□□□□□ -2.08
UBP11YKR098C YJL213WP40896 331 aa2.05□□□□□ -2.08
UBP11YKR098C IDP2P41939 412 aa2.05□□□□□ -2.08
UBP11YKR098C YHC3P47040 408 aa2.05□□□□□ -2.08
UBP11YKR098C ABM1P47146 123 aa2.05□□□□□ -2.08
UBP11YKR098C YGL114WP53134 725 aa2.05□□□□□ -2.08
UBP11YKR098C MSO1P53604 210 aaKnown RBP2.05□□□□□ -2.08
UBP11YKR098C ARP5P53946 755 aa2.05□□□□□ -2.08
UBP11YKR098C CUR1Q06469 252 aa2.05□□□□□ -2.08
UBP11YKR098C GLE1Q12315 538 aa2.05□□□□□ -2.08
UBP11YKR098C RRP36Q12481 300 aaPredicted RBP2.05□□□□□ -2.08
UBP11YKR098C GDH1P07262 454 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C CKI1P20485 582 aa2.04□□□□□ -2.08
UBP11YKR098C AGA1P32323 725 aa2.04□□□□□ -2.08
UBP11YKR098C EFB1P32471 206 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C ZUO1P32527 433 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C MUD1P32605 298 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C VAM7P32912 316 aa2.04□□□□□ -2.08
UBP11YKR098C YPT53P36019 220 aa2.04□□□□□ -2.08
UBP11YKR098C MNN9P39107 395 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C PRP39P39682 629 aaKnown RBP2.04□□□□□ -2.08
UBP11YKR098C YFR018CP43599 363 aa2.04□□□□□ -2.08
UBP11YKR098C HNT3Q08702 217 aa2.04□□□□□ -2.08
UBP11YKR098C SPO24Q3E752 67 aa2.04□□□□□ -2.08
UBP11YKR098C INO80P53115 1489 aa2.04□□□□□ -2.08
UBP11YKR098C TIF5P38431 405 aaKnown RBP2.03□□□□□ -2.08
UBP11YKR098C YMR134WP40207 237 aa2.03□□□□□ -2.08
UBP11YKR098C LOC1P43586 204 aaPredicted RBP2.03□□□□□ -2.08
UBP11YKR098C YNL146WP53906 100 aa2.03□□□□□ -2.08
UBP11YKR098C SMP3Q04174 516 aa2.03□□□□□ -2.08
UBP11YKR098C YLR297WQ05899 129 aa2.03□□□□□ -2.08
UBP11YKR098C YLR108CQ12259 485 aa2.03□□□□□ -2.08
UBP11YKR098C YDR262WQ12331 272 aa2.03□□□□□ -2.08
UBP11YKR098C CYC3P06182 269 aa2.03□□□□□ -2.08
UBP11YKR098C YLL053CP0CD98 152 aa2.03□□□□□ -2.08
UBP11YKR098C MRPL8P22353 238 aa2.03□□□□□ -2.08
UBP11YKR098C MXR2P25566 168 aa2.03□□□□□ -2.08
UBP11YKR098C SSE1P32589 693 aaKnown RBP2.03□□□□□ -2.08
UBP11YKR098C GEP4P38812 185 aa2.03□□□□□ -2.08
UBP11YKR098C CRZ1P53968 678 aa2.03□□□□□ -2.08
UBP11YKR098C CAB5Q03941 241 aa2.03□□□□□ -2.08
UBP11YKR098C MDM36Q06820 579 aa2.03□□□□□ -2.08
UBP11YKR098C NDD1Q08887 554 aa2.03□□□□□ -2.08
UBP11YKR098C PFK27Q12471 397 aaPredicted RBP2.03□□□□□ -2.08
UBP11YKR098C YCL021W-AQ96VH3 125 aa2.03□□□□□ -2.08
UBP11YKR098C OM45P16547 393 aa2.02□□□□□ -2.09
UBP11YKR098C FAR1P21268 830 aa2.02□□□□□ -2.09
UBP11YKR098C MNS1P32906 549 aa2.02□□□□□ -2.09
UBP11YKR098C RIB7P33312 244 aa2.02□□□□□ -2.09
UBP11YKR098C TIR2P33890 251 aa2.02□□□□□ -2.09
UBP11YKR098C SWC5P38326 303 aa2.02□□□□□ -2.09
UBP11YKR098C SBE22P38814 852 aa2.02□□□□□ -2.09
UBP11YKR098C END3P39013 349 aa2.02□□□□□ -2.09
UBP11YKR098C CCT4P39078 528 aaKnown RBP2.02□□□□□ -2.09
UBP11YKR098C SEC9P40357 651 aa2.02□□□□□ -2.09
UBP11YKR098C YIL067CP40514 678 aa2.02□□□□□ -2.09
UBP11YKR098C YFL067WP43537 175 aa2.02□□□□□ -2.09
UBP11YKR098C NCA3P46955 337 aa2.02□□□□□ -2.09
UBP11YKR098C RIB4P50861 169 aaPredicted RBP2.02□□□□□ -2.09
UBP11YKR098C MTM1P53320 366 aa2.02□□□□□ -2.09
UBP11YKR098C NAT4Q04751 285 aa2.02□□□□□ -2.09
UBP11YKR098C RTT103Q05543 409 aa2.02□□□□□ -2.09
UBP11YKR098C SHS1Q07657 551 aa2.02□□□□□ -2.09
UBP11YKR098C GAT3Q07928 141 aa2.02□□□□□ -2.09
UBP11YKR098C YRM1Q12340 786 aa2.02□□□□□ -2.09
UBP11YKR098C ICT1Q12385 394 aa2.02□□□□□ -2.09
UBP11YKR098C AHC1Q12433 566 aa2.02□□□□□ -2.09
UBP11YKR098C YER078W-AQ3E7A2 54 aa2.02□□□□□ -2.09
UBP11YKR098C UTR1P21373 530 aa2.02□□□□□ -2.09
UBP11YKR098C CPR4P25334 318 aa2.02□□□□□ -2.09
UBP11YKR098C PRO3P32263 286 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 185.7 ms