RNA–Protein interactions for RNA: YKL061W

BLI1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene BLI1, Length 342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLI1	YKL061W	OTU2	P38747	307 aa	Known RBP	0.62	□□□□□ -2.31
BLI1	YKL061W	ARF3	P40994	183 aa	RIP-Chip data	0.62	□□□□□ -2.31	not detected
BLI1	YKL061W	STB1	P42845	420 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	IRC6	P43615	237 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	ABM1	P47146	123 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	OCA2	P53949	197 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	COG4	Q06096	861 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	POM152	P39685	1337 aa		0.62	□□□□□ -2.31
BLI1	YKL061W	RPS19A	P07280	144 aa	Known RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	RPS19B	P07281	144 aa	Predicted RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	ANP1	P32629	500 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	SRB2	P34162	210 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	DBP7	P36120	742 aa	Known RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	FRM2	P37261	193 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	ECM8	P38246	354 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	MMS4	P38257	691 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	NTC20	P38302	140 aa	Predicted RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	YGP1	P38616	354 aa	Known RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	WSC4	P38739	605 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	GPI16	P38875	610 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	COQ5	P49017	307 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	VEL1	P53058	206 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	ZRG17	P53735	605 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	VAC7	P53950	1165 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	PRP38	Q00723	242 aa	Predicted RBP	0.61	□□□□□ -2.31
BLI1	YKL061W	SPR6	Q01684	191 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	SKO1	Q02100	647 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	MMT1	Q03218	510 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	YDR115W	Q04598	105 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	PRM6	Q04705	352 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	YDL114W	Q07530	308 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	LOT6	Q07923	191 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	RTN2	Q12443	393 aa		0.61	□□□□□ -2.31
BLI1	YKL061W	STE7	P06784	515 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	HOM3	P10869	527 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	FUS3	P16892	353 aa	Known RBP	0.6	□□□□□ -2.31
BLI1	YKL061W	URA4	P20051	364 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	TOA2	P32774	122 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	SKN1	P33336	771 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	SPO23	P33757	523 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	TIR2	P33890	251 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	AST1	P35183	429 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	SOL2	P37262	315 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	PEX22	P39718	180 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	RRT13	P40042	185 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	SER3	P40054	469 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	CIN2	P46670	268 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	YJL144W	P47009	104 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	YGR117C	P53270	476 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	RRN9	P53437	365 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	ACL4	Q03771	387 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	RPN9	Q04062	393 aa	Known RBP	0.6	□□□□□ -2.31
BLI1	YKL061W	MSC3	Q05812	728 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	DCS1	Q06151	350 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	MMR1	Q06324	491 aa		0.6	□□□□□ -2.31
BLI1	YKL061W	AUS1	Q08409	1394 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	RIP-Chip
BLI1	YKL061W	ATP1	P07251	545 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	RPS18A	P0CX55	146 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	RPS18B	P0CX56	146 aa	Predicted RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	SRV2	P17555	526 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	ERV1	P27882	189 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	BRF1	P29056	596 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	RAD5	P32849	1169 aa	Predicted RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	MCR1	P36060	302 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	SDH4	P37298	181 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	ASC1	P38011	319 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	TRR2	P38816	342 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	UTP9	P38882	575 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	YER079W	P40052	210 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	YIR035C	P40579	254 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	COS4	P43542	379 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	CTK3	P46963	296 aa	Predicted RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	STE24	P47154	453 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	PMT5	P52867	743 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	RRP46	P53256	223 aa	Predicted RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	RPT4	P53549	437 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	MRPL19	P53875	158 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	BNI5	P53890	448 aa	Known RBP	0.59	□□□□□ -2.31
BLI1	YKL061W	RMI1	Q02685	241 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	KAP120	Q02932	1032 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	YMR130W	Q04223	302 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	TAF11	Q04226	346 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	ROY1	Q04847	553 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	YLR345W	Q06137	509 aa		0.59	□□□□□ -2.31
BLI1	YKL061W	OPI3	P05375	206 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	DST1	P07273	309 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	RPS23A	P0CX29	145 aa	Known RBP	0.58	□□□□□ -2.32
BLI1	YKL061W	RPS23B	P0CX30	145 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	MRP7	P12687	371 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	CLC1	P17891	233 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	COX10	P21592	462 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	EPT1	P22140	391 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	YCR051W	P25631	222 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	SHE1	P38200	338 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	ECM34	P38728	170 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	LSM12	P38828	187 aa	Known RBP	0.58	□□□□□ -2.32
BLI1	YKL061W	STN1	P38960	494 aa		0.58	□□□□□ -2.32
BLI1	YKL061W	CAK1	P43568	368 aa	Predicted RBP	0.58	□□□□□ -2.32
BLI1	YKL061W	AIP1	P46680	615 aa	Known RBP	0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms