RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJR029W	YJR029W	MGS1	P40151	587 aa		1	□□□□□ -2.25
YJR029W	YJR029W	GUF1	P46943	645 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YJR096W	P47137	282 aa		1	□□□□□ -2.25
YJR029W	YJR029W	APT1	P49435	187 aa	Known RBP	1	□□□□□ -2.25
YJR029W	YJR029W	PPT1	P53043	513 aa		1	□□□□□ -2.25
YJR029W	YJR029W	UFD1	P53044	361 aa		1	□□□□□ -2.25
YJR029W	YJR029W	USE1	P53146	245 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YNR040W	P53736	256 aa		1	□□□□□ -2.25
YJR029W	YJR029W	BOR1	P53838	576 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YNL193W	P53870	558 aa		1	□□□□□ -2.25
YJR029W	YJR029W	TPP1	Q03796	238 aa		1	□□□□□ -2.25
YJR029W	YJR029W	PRM6	Q04705	352 aa		1	□□□□□ -2.25
YJR029W	YJR029W	UPS1	Q05776	175 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YLR346C	Q06139	101 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YOL075C	Q08234	1294 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YOR378W	Q08902	515 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YOR342C	Q12182	319 aa		1	□□□□□ -2.25
YJR029W	YJR029W	YLR126C	Q12288	251 aa		1	□□□□□ -2.25
YJR029W	YJR029W	PDH1	Q12428	516 aa	Known RBP	1	□□□□□ -2.25
YJR029W	YJR029W	LSO1	Q3E827	93 aa		1	□□□□□ -2.25
YJR029W	YJR029W	PET20	Q99373	253 aa		1	□□□□□ -2.25
YJR029W	YJR029W	DST1	P07273	309 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	DSF1	P0CX08	502 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YNR073C	P0CX09	502 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	RPL4A	P10664	362 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	AEP2	P22136	580 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	MSK1	P32048	576 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	LST4	P34239	828 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	BMH2	P34730	273 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	NNK1	P36003	928 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	TPO5	P36029	618 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	TCD2	P36101	447 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	MRPL4	P36517	319 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YBR241C	P38142	488 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	RFS1	P38234	210 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	YBR062C	P38239	180 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	TCD1	P38756	429 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	CCT3	P39077	534 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	SEN34	P39707	275 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	AVT2	P39981	480 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	GET2	P40056	285 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YER134C	P40081	178 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YRB1	P41920	201 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	SPG5	P42933	373 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	NUP57	P48837	541 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	ASN2	P49090	572 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	RPL4B	P49626	362 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	COS10	P52924	374 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	FLC3	P53121	802 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	ERV14	P53173	138 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YGR111W	P53265	400 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SUR7	P54003	302 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YVH1	Q02256	364 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	FMP30	Q02883	468 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	PEX25	Q02969	394 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	VPS71	Q03433	280 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YMR007W	Q03675	126 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SNX41	Q04053	625 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	PPM1	Q04081	328 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YMR130W	Q04223	302 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	URC2	Q04411	772 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	FAR8	Q05040	523 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YPL199C	Q08954	240 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	NBL1	Q3E7Y6	73 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SSM4	P40318	1319 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	FAB1	P34756	2278 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	CDC8	P00572	216 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	CIT1	P00890	479 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	RPL3	P14126	387 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	MNE1	P24720	663 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	DBP2	P24783	546 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	PHO84	P25297	587 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	ARE1	P25628	610 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	HEM3	P28789	327 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	LDS1	P31379	325 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	APE2	P32454	952 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	EFB1	P32471	206 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	MKK1	P32490	508 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	ECM25	P32525	599 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	LHP1	P33399	275 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	YOX1	P34161	385 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YET1	P35723	206 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	POP4	P38336	279 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SUL1	P38359	859 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YHR097C	P38809	366 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	LNP1	P38878	278 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	UBP5	P39944	805 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	IRC22	P40006	225 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SCS2	P40075	244 aa	Known RBP	0.99	□□□□□ -2.25
YJR029W	YJR029W	MEP1	P40260	492 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SOK1	P40317	901 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YIL166C	P40445	542 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	AIM25	P47140	327 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	MAL11	P53048	616 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	ALG12	P53730	551 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	CAF120	P53836	1060 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	TIM10	P87108	93 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	OST6	Q03723	332 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	YMR166C	Q03829	368 aa		0.99	□□□□□ -2.25
YJR029W	YJR029W	SND1	Q04007	877 aa		0.99	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms