RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W AHC1Q12433 566 aa2.07□□□□□ -2.08
RPL40AYIL148W YER078W-AQ3E7A2 54 aa2.07□□□□□ -2.08
RPL40AYIL148W CAP2P13517 287 aa2.06□□□□□ -2.08
RPL40AYIL148W VMA2P16140 517 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W MRPL8P22353 238 aa2.06□□□□□ -2.08
RPL40AYIL148W UBA1P22515 1024 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W FAA1P30624 700 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W ANP1P32629 500 aa2.06□□□□□ -2.08
RPL40AYIL148W MCR1P36060 302 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W ECM8P38246 354 aa2.06□□□□□ -2.08
RPL40AYIL148W STP2P38704 541 aa2.06□□□□□ -2.08
RPL40AYIL148W GEP4P38812 185 aa2.06□□□□□ -2.08
RPL40AYIL148W CHS6P40955 746 aa2.06□□□□□ -2.08
RPL40AYIL148W YFR057WP43625 151 aa2.06□□□□□ -2.08
RPL40AYIL148W LCB3P47013 409 aa2.06□□□□□ -2.08
RPL40AYIL148W STE24P47154 453 aa2.06□□□□□ -2.08
RPL40AYIL148W CUE3P53137 624 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W CWC22P53333 577 aaKnown RBP2.06□□□□□ -2.08
RPL40AYIL148W BOR1P53838 576 aa2.06□□□□□ -2.08
RPL40AYIL148W YMR310CQ04867 317 aaPredicted RBP2.06□□□□□ -2.08
RPL40AYIL148W SNT309Q06091 175 aaPredicted RBP2.06□□□□□ -2.08
RPL40AYIL148W MDM36Q06820 579 aa2.06□□□□□ -2.08
RPL40AYIL148W IRC25Q07951 179 aa2.06□□□□□ -2.08
RPL40AYIL148W RNH203Q12338 110 aa2.06□□□□□ -2.08
RPL40AYIL148W HMS1Q12398 434 aa2.06□□□□□ -2.08
RPL40AYIL148W PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08 RIP-Chip
RPL40AYIL148W MAS1P10507 462 aa2.05□□□□□ -2.08
RPL40AYIL148W SCH9P11792 824 aaKnown RBP2.05□□□□□ -2.08
RPL40AYIL148W CLN3P13365 580 aa2.05□□□□□ -2.08
RPL40AYIL148W NAM9P27929 486 aa2.05□□□□□ -2.08
RPL40AYIL148W PRR1P28708 518 aa2.05□□□□□ -2.08
RPL40AYIL148W HMX1P32339 317 aa2.05□□□□□ -2.08
RPL40AYIL148W POP2P39008 433 aa2.05□□□□□ -2.08
RPL40AYIL148W SEC9P40357 651 aa2.05□□□□□ -2.08
RPL40AYIL148W PAN6P40459 309 aa2.05□□□□□ -2.08
RPL40AYIL148W YGR210CP42942 411 aa2.05□□□□□ -2.08
RPL40AYIL148W YPI1P43587 155 aa2.05□□□□□ -2.08
RPL40AYIL148W YNR068CP53754 272 aa2.05□□□□□ -2.08
RPL40AYIL148W RRB1Q04225 511 aaKnown RBP2.05□□□□□ -2.08
RPL40AYIL148W RTN1Q04947 295 aaKnown RBP2.05□□□□□ -2.08
RPL40AYIL148W YDR286CQ05530 114 aa2.05□□□□□ -2.08
RPL40AYIL148W DBP9Q06218 594 aaKnown RBP2.05□□□□□ -2.08
RPL40AYIL148W APC2Q12440 853 aa2.05□□□□□ -2.08
RPL40AYIL148W PCL9Q12477 304 aa2.05□□□□□ -2.08
RPL40AYIL148W MEX67Q99257 599 aaKnown RBP2.05□□□□□ -2.08
RPL40AYIL148W TAL1P15019 335 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W THR4P16120 514 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W PSO2P30620 661 aa2.04□□□□□ -2.08
RPL40AYIL148W MSK1P32048 576 aa2.04□□□□□ -2.08
RPL40AYIL148W EFB1P32471 206 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W YKL097CP34245 136 aa2.04□□□□□ -2.08
RPL40AYIL148W SIF2P38262 535 aa2.04□□□□□ -2.08
RPL40AYIL148W SBE22P38814 852 aa2.04□□□□□ -2.08
RPL40AYIL148W YNL208WP40159 199 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W LYS12P40495 371 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W AIP1P46680 615 aaKnown RBP2.04□□□□□ -2.08
RPL40AYIL148W HST1P53685 503 aa2.04□□□□□ -2.08
RPL40AYIL148W RIF2Q06208 395 aa2.04□□□□□ -2.08
RPL40AYIL148W ARR1Q06596 294 aa2.04□□□□□ -2.08
RPL40AYIL148W SHS1Q07657 551 aa2.04□□□□□ -2.08
RPL40AYIL148W PGC1Q08959 321 aa2.04□□□□□ -2.08
RPL40AYIL148W YGK3Q12222 375 aaPredicted RBP2.04□□□□□ -2.08
RPL40AYIL148W ERV2Q12284 196 aa2.04□□□□□ -2.08
RPL40AYIL148W JID1Q12350 301 aa2.04□□□□□ -2.08
RPL40AYIL148W RNA1P11745 407 aaKnown RBP2.03□□□□□ -2.08
RPL40AYIL148W RVS161P25343 265 aaKnown RBP2.03□□□□□ -2.08
RPL40AYIL148W RDS1P25611 832 aa2.03□□□□□ -2.08
RPL40AYIL148W PHA2P32452 334 aa2.03□□□□□ -2.08
RPL40AYIL148W YEL043WP32618 956 aa2.03□□□□□ -2.08
RPL40AYIL148W UIP5P36137 443 aa2.03□□□□□ -2.08
RPL40AYIL148W MRPL10P36520 322 aa2.03□□□□□ -2.08
RPL40AYIL148W AVT5P38176 459 aa2.03□□□□□ -2.08
RPL40AYIL148W YBR137WP38276 179 aa2.03□□□□□ -2.08
RPL40AYIL148W YHK8P38776 514 aa2.03□□□□□ -2.08
RPL40AYIL148W YHR182WP38870 785 aa2.03□□□□□ -2.08
RPL40AYIL148W SIM1P40472 476 aa2.03□□□□□ -2.08
RPL40AYIL148W REE1P40893 198 aa2.03□□□□□ -2.08
RPL40AYIL148W SEC27P41811 889 aaKnown RBP2.03□□□□□ -2.08
RPL40AYIL148W FYV8P46949 817 aaKnown RBP2.03□□□□□ -2.08
RPL40AYIL148W BIR1P47134 954 aa2.03□□□□□ -2.08
RPL40AYIL148W CLD1P53264 445 aa2.03□□□□□ -2.08
RPL40AYIL148W MTM1P53320 366 aa2.03□□□□□ -2.08
RPL40AYIL148W YNL146WP53906 100 aa2.03□□□□□ -2.08
RPL40AYIL148W YNL143CP53908 130 aa2.03□□□□□ -2.08
RPL40AYIL148W RSA1Q08932 381 aa2.03□□□□□ -2.08
RPL40AYIL148W YCR024C-BQ3E7Z8 88 aa2.03□□□□□ -2.08
RPL40AYIL148W FSH3Q99369 266 aa2.03□□□□□ -2.08
RPL40AYIL148W CYC3P06182 269 aa2.02□□□□□ -2.09
RPL40AYIL148W STE3P06783 470 aa2.02□□□□□ -2.09
RPL40AYIL148W YLL053CP0CD98 152 aa2.02□□□□□ -2.09
RPL40AYIL148W SSC1P0CS90 654 aaKnown RBP2.02□□□□□ -2.09
RPL40AYIL148W MSI1P13712 422 aa2.02□□□□□ -2.09
RPL40AYIL148W DAP2P18962 818 aa2.02□□□□□ -2.09
RPL40AYIL148W RPB5P20434 215 aa2.02□□□□□ -2.09
RPL40AYIL148W KRR1P25586 316 aaPredicted RBP2.02□□□□□ -2.09
RPL40AYIL148W POT1P27796 417 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
RPL40AYIL148W SSE1P32589 693 aaKnown RBP2.02□□□□□ -2.09
RPL40AYIL148W TIR2P33890 251 aa2.02□□□□□ -2.09
RPL40AYIL148W YBR139WP38109 508 aa2.02□□□□□ -2.09
RPL40AYIL148W ADH5P38113 351 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms