RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W ATG38Q05789 226 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W SEI1Q06058 285 aa9.36□□□□□ -0.91
UBA4YHR111W ARR1Q06596 294 aa9.36□□□□□ -0.91
UBA4YHR111W AIR2Q12476 344 aaKnown RBP9.36□□□□□ -0.91
UBA4YHR111W TAD3Q9URQ3 322 aa9.36□□□□□ -0.91
UBA4YHR111W DAT1P13483 248 aaKnown RBP9.35□□□□□ -0.91
UBA4YHR111W RPS1BP23248 255 aaKnown RBP9.35□□□□□ -0.91
UBA4YHR111W PBN1P25580 416 aa9.35□□□□□ -0.91
UBA4YHR111W GRE3P38715 327 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
UBA4YHR111W ANS1P38832 159 aa9.35□□□□□ -0.91
UBA4YHR111W HRB1P38922 454 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
UBA4YHR111W PKP1P40530 394 aa9.35□□□□□ -0.91
UBA4YHR111W INP1Q03694 420 aa9.35□□□□□ -0.91
UBA4YHR111W YLR446WQ06204 433 aa9.35□□□□□ -0.91
UBA4YHR111W PSR1Q07800 427 aa9.35□□□□□ -0.91
UBA4YHR111W DCI1Q08558 271 aa9.35□□□□□ -0.91
UBA4YHR111W YRM1Q12340 786 aa9.35□□□□□ -0.91
UBA4YHR111W ARF1P11076 181 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W THR1P17423 357 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W UGA1P17649 471 aa9.34□□□□□ -0.91
UBA4YHR111W RPB10P22139 70 aa9.34□□□□□ -0.91
UBA4YHR111W GRR1P24814 1151 aa9.34□□□□□ -0.91
UBA4YHR111W MEF1P25039 761 aa9.34□□□□□ -0.91
UBA4YHR111W DMC1P25453 334 aa9.34□□□□□ -0.91
UBA4YHR111W TEF4P36008 412 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W SNU114P36048 1008 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W YEL057CP39983 233 aa9.34□□□□□ -0.91
UBA4YHR111W ARF3P40994 183 aaRIP-Chip data9.34□□□□□ -0.91not detected
UBA4YHR111W ECO1P43605 281 aa9.34□□□□□ -0.91
UBA4YHR111W YNL033WP53964 284 aa9.34□□□□□ -0.91
UBA4YHR111W YNL019CP53975 284 aa9.34□□□□□ -0.91
UBA4YHR111W NCE101Q02820 53 aa9.34□□□□□ -0.91
UBA4YHR111W SPC24Q04477 213 aa9.34□□□□□ -0.91
UBA4YHR111W PAL1Q05518 499 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W BCP1Q06338 283 aa9.34□□□□□ -0.91
UBA4YHR111W RPS21BQ3E754 87 aaKnown RBP9.34□□□□□ -0.91
UBA4YHR111W MDM12Q92328 271 aa9.34□□□□□ -0.91
UBA4YHR111W GPH1P06738 902 aaKnown RBP9.33□□□□□ -0.92
UBA4YHR111W GAL3P13045 520 aa9.33□□□□□ -0.92
UBA4YHR111W YAP1P19880 650 aaKnown RBP9.33□□□□□ -0.92
UBA4YHR111W KGD1P20967 1014 aaKnown RBP9.33□□□□□ -0.92
UBA4YHR111W CWH43P25618 953 aa9.33□□□□□ -0.92
UBA4YHR111W SSE1P32589 693 aaKnown RBP9.33□□□□□ -0.92
UBA4YHR111W TOD6P34219 525 aa9.33□□□□□ -0.92
UBA4YHR111W YEL020CP39994 560 aa9.33□□□□□ -0.92
UBA4YHR111W PBP1P53297 722 aaKnown RBP9.33□□□□□ -0.92
UBA4YHR111W GTR1Q00582 310 aa9.33□□□□□ -0.92
UBA4YHR111W PFA5Q03289 374 aa9.33□□□□□ -0.92
UBA4YHR111W ATG26Q06321 1198 aa9.33□□□□□ -0.92
UBA4YHR111W YDL177CQ12257 170 aa9.33□□□□□ -0.92
UBA4YHR111W MF(ALPHA)1P01149 165 aa9.32□□□□□ -0.92
UBA4YHR111W FLP1P03870 423 aa9.32□□□□□ -0.92
UBA4YHR111W ERG8P24521 451 aa9.32□□□□□ -0.92
UBA4YHR111W HSP150P32478 413 aa9.32□□□□□ -0.92
UBA4YHR111W MRP8P35719 219 aa9.32□□□□□ -0.92
UBA4YHR111W EXO84P38261 753 aa9.32□□□□□ -0.92
UBA4YHR111W TDP1P38319 544 aa9.32□□□□□ -0.92
UBA4YHR111W AST2P39945 430 aaKnown RBP9.32□□□□□ -0.92
UBA4YHR111W RPE1P46969 238 aa9.32□□□□□ -0.92
UBA4YHR111W PDR16P53860 351 aaKnown RBP9.32□□□□□ -0.92
UBA4YHR111W IGO1P53897 168 aa9.32□□□□□ -0.92
UBA4YHR111W SVL3Q03088 825 aaKnown RBP9.32□□□□□ -0.92
UBA4YHR111W RSC9Q03124 581 aa9.32□□□□□ -0.92
UBA4YHR111W YKU80Q04437 629 aa9.32□□□□□ -0.92
UBA4YHR111W DCR2Q05924 578 aa9.32□□□□□ -0.92
UBA4YHR111W FMP45Q07651 309 aa9.32□□□□□ -0.92
UBA4YHR111W OSW1Q08692 278 aa9.32□□□□□ -0.92
UBA4YHR111W KSS1P14681 368 aa9.31□□□□□ -0.92
UBA4YHR111W ERD1P16151 362 aa9.31□□□□□ -0.92
UBA4YHR111W NCP1P16603 691 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W DBP3P20447 523 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W YIM1P28625 365 aa9.31□□□□□ -0.92
UBA4YHR111W BIG1P38813 335 aa9.31□□□□□ -0.92
UBA4YHR111W GPI16P38875 610 aa9.31□□□□□ -0.92
UBA4YHR111W YHR218WP38899 603 aa9.31□□□□□ -0.92
UBA4YHR111W TAT2P38967 592 aa9.31□□□□□ -0.92
UBA4YHR111W SOK1P40317 901 aa9.31□□□□□ -0.92
UBA4YHR111W SMK1P41808 388 aa9.31□□□□□ -0.92
UBA4YHR111W TOM22P49334 152 aa9.31□□□□□ -0.92
UBA4YHR111W CUZ1P53899 274 aa9.31□□□□□ -0.92
UBA4YHR111W SPO77Q06134 477 aa9.31□□□□□ -0.92
UBA4YHR111W ATP2P00830 511 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W PWP1P21304 576 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W PEX6P33760 1030 aa9.31□□□□□ -0.92
UBA4YHR111W FZO1P38297 855 aa9.31□□□□□ -0.92
UBA4YHR111W TSL1P38427 1098 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W DSS1P39112 969 aa9.31□□□□□ -0.92
UBA4YHR111W GET1P53192 235 aa9.31□□□□□ -0.92
UBA4YHR111W TWF1P53250 332 aa9.31□□□□□ -0.92
UBA4YHR111W GPI1P53306 609 aa9.31□□□□□ -0.92
UBA4YHR111W DCP2P53550 970 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W DBP6P53734 629 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W KRE28Q04431 385 aa9.31□□□□□ -0.92
UBA4YHR111W ERB1Q04660 807 aaKnown RBP9.31□□□□□ -0.92
UBA4YHR111W ASA1Q06822 443 aa9.31□□□□□ -0.92
UBA4YHR111W RRT8Q08219 342 aa9.31□□□□□ -0.92
UBA4YHR111W ADE5,7P07244 802 aaKnown RBP9.3□□□□□ -0.92
UBA4YHR111W MSS18P08593 268 aa9.3□□□□□ -0.92
UBA4YHR111W YPT7P32939 208 aa9.3□□□□□ -0.92
UBA4YHR111W NSG1P38837 291 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms