RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	HIS7	P33734	552 aa	Known RBP	5.02	□□□□□ -1.61
RSC30	YHR056C	NSG1	P38837	291 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	YJL206C	P39529	758 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	AST2	P39945	430 aa	Known RBP	5.02	□□□□□ -1.61
RSC30	YHR056C	ZIP2	P53061	704 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
RSC30	YHR056C	RIM13	Q03792	727 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	YPQ2	Q06328	317 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	YOR223W	Q12015	292 aa		5.02	□□□□□ -1.61
RSC30	YHR056C	COS2	P0CX12	379 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	COS3	P0CX13	379 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	KGD1	P20967	1014 aa	Known RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	ROX1	P25042	368 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	YKL187C	P34231	750 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	FET3	P38993	636 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	YER188W	P40103	239 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	QRI1	P43123	477 aa	Known RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	COS4	P43542	379 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	ARR1	Q06596	294 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	PUN1	Q06991	263 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	CAT2	P32796	670 aa	Known RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	LOS1	P33418	1100 aa	Predicted RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	MFT1	P33441	392 aa	Known RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	ECM10	P39987	644 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	PEP8	P40335	379 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	IDP2	P41939	412 aa		5.01	□□□□□ -1.61
RSC30	YHR056C	YPT32	P51996	222 aa	Known RBP	5.01	□□□□□ -1.61
RSC30	YHR056C	BCK2	P33306	851 aa		5	□□□□□ -1.61
RSC30	YHR056C	DLD3	P39976	496 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	PRM15	Q03262	622 aa		5	□□□□□ -1.61
RSC30	YHR056C	HAS1	Q03532	505 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	YDR124W	Q04608	324 aa		5	□□□□□ -1.61
RSC30	YHR056C	ATG38	Q05789	226 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	UAF30	Q08747	228 aa		5	□□□□□ -1.61
RSC30	YHR056C	YDL180W	Q12301	547 aa		5	□□□□□ -1.61
RSC30	YHR056C	MHF1	Q3E835	90 aa		5	□□□□□ -1.61
RSC30	YHR056C	YPT7	P32939	208 aa		5	□□□□□ -1.61
RSC30	YHR056C	RPT5	P33297	434 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	HCS1	P34243	683 aa		5	□□□□□ -1.61
RSC30	YHR056C	EXO84	P38261	753 aa		5	□□□□□ -1.61
RSC30	YHR056C	YBR220C	P38318	560 aa		5	□□□□□ -1.61
RSC30	YHR056C	PRP31	P49704	494 aa	Predicted RBP	5	□□□□□ -1.61
RSC30	YHR056C	MAL13	P53338	473 aa		5	□□□□□ -1.61
RSC30	YHR056C	MET31	Q03081	177 aa		5	□□□□□ -1.61
RSC30	YHR056C	MSC1	Q03104	513 aa		5	□□□□□ -1.61
RSC30	YHR056C	BUD22	Q04347	519 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	MCM16	Q12262	181 aa		5	□□□□□ -1.61
RSC30	YHR056C	YPR071W	Q12346	211 aa		5	□□□□□ -1.61
RSC30	YHR056C	DAT1	P13483	248 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	HSC82	P15108	705 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	ATG7	P38862	630 aa		5	□□□□□ -1.61
RSC30	YHR056C	ARF3	P40994	183 aa	RIP-Chip data	5	□□□□□ -1.61	not detected
RSC30	YHR056C	YFL051C	P43552	160 aa		5	□□□□□ -1.61
RSC30	YHR056C	AIF1	P52923	378 aa		5	□□□□□ -1.61
RSC30	YHR056C	YMR209C	Q03648	457 aa		5	□□□□□ -1.61
RSC30	YHR056C	UTP21	Q06078	939 aa	Predicted RBP	5	□□□□□ -1.61
RSC30	YHR056C	TMC1	Q08422	150 aa	Predicted RBP	5	□□□□□ -1.61
RSC30	YHR056C	RPN5	Q12250	445 aa	Known RBP	5	□□□□□ -1.61
RSC30	YHR056C	PTH2	P34222	208 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	CAF4	P36130	643 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	CHK1	P38147	527 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	YIL165C	P40446	119 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	YIP4	P53093	235 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	NOP19	P53317	196 aa	Predicted RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	VHS3	Q08438	674 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	RHO1	P06780	209 aa	Known RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	SAN1	P22470	610 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	ITR1	P30605	584 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	AAR2	P32357	355 aa	Predicted RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	YNL320W	P42840	284 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	GTO1	P48239	356 aa		4.99	□□□□□ -1.61
RSC30	YHR056C	MTR3	P48240	250 aa	Predicted RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	EAF7	P53911	425 aa	Known RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	RPL6A	Q02326	176 aa	Known RBP	4.99	□□□□□ -1.61
RSC30	YHR056C	CAR1	P00812	333 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	HTA2	P04912	132 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	THR1	P17423	357 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	SCO1	P23833	295 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	DPB3	P27344	201 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	PUP2	P32379	260 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	YEN1	P40028	759 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	COG3	P40094	801 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	MRPS18	P42847	217 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	IGO1	P53897	168 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	YDR476C	Q03362	224 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	SRL2	Q12020	392 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	SWM1	Q12379	170 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	ATP2	P00830	511 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	RHO2	P06781	192 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	RPS8A	P0CX39	200 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	RPS8B	P0CX40	200 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	KNS1	P32350	737 aa	Predicted RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	TEF4	P36008	412 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	COS111	P38308	924 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	LYS12	P40495	371 aa	Known RBP	4.98	□□□□□ -1.61
RSC30	YHR056C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RSC30	YHR056C	YJR098C	P47139	656 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	DAM1	P53267	343 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	MCP1	Q12106	302 aa		4.98	□□□□□ -1.61
RSC30	YHR056C	ALG7	P07286	448 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms