RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A IES6P32617 166 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A NRP1P32770 719 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YGR109W-AYGR109W-A YSC83P32792 385 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A YHK8P38776 514 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A LRP1P38801 184 aaKnown RBP2.51□□□□□ -2.01
YGR109W-AYGR109W-A MMF1P40185 145 aaKnown RBP2.51□□□□□ -2.01
YGR109W-AYGR109W-A CRH1P53301 507 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A MRPS16Q02608 121 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A TDA1Q03533 586 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A RTN1Q04947 295 aaKnown RBP2.51□□□□□ -2.01
YGR109W-AYGR109W-A YPQ1Q12010 308 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A RUP1Q12242 671 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A PAR32Q12515 295 aaKnown RBP2.51□□□□□ -2.01
YGR109W-AYGR109W-A PHO91P27514 894 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A EGT2P42835 1041 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A STE24P47154 453 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A MST27P53176 234 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A SPR6Q01684 191 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A YET2Q04210 160 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A CMS1Q07897 291 aaKnown RBP2.5□□□□□ -2.01
YGR109W-AYGR109W-A NSE1Q07913 336 aa2.5□□□□□ -2.01
YGR109W-AYGR109W-A DNL4Q08387 944 aaPredicted RBP2.5□□□□□ -2.01
YGR109W-AYGR109W-A POM152P39685 1337 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A COX4P04037 155 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A RRP7P25368 297 aaPredicted RBP2.49□□□□□ -2.01
YGR109W-AYGR109W-A YEF1P32622 495 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A PFF1P38244 976 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A OM14P38325 134 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A ATG18P43601 500 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A AIM24P47127 394 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A YGR117CP53270 476 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A MKC7P53379 596 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A NDL1Q06568 189 aa2.49□□□□□ -2.01
YGR109W-AYGR109W-A RPL12AP0CX53 165 aaKnown RBP2.48□□□□□ -2.01
YGR109W-AYGR109W-A RPL12BP0CX54 165 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A COX13P32799 129 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A MRPS9P38120 278 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A GPX2P38143 162 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A PTI1P39927 425 aaPredicted RBP2.48□□□□□ -2.01
YGR109W-AYGR109W-A HAC1P41546 238 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A PGU1P47180 361 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A YIP5P53108 310 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A RRN9P53437 365 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A YMR102CQ03177 834 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A ECM11Q04110 302 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A URC2Q04411 772 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A MFG1Q07684 458 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A SMC5Q08204 1093 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A IES4Q08561 116 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A EAF3Q12432 401 aa2.48□□□□□ -2.01
YGR109W-AYGR109W-A PIS1P06197 220 aaKnown RBP2.47□□□□□ -2.01
YGR109W-AYGR109W-A SLM5P25345 492 aaKnown RBP2.47□□□□□ -2.01
YGR109W-AYGR109W-A CDC50P25656 391 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A TOA2P32774 122 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A ANR2P36090 516 aaPredicted RBP2.47□□□□□ -2.01
YGR109W-AYGR109W-A YHR177WP38867 453 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A MNL1P38888 796 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A MLH1P38920 769 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A TIM17P39515 158 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A GDI1P39958 451 aaKnown RBP2.47□□□□□ -2.01
YGR109W-AYGR109W-A ATM1P40416 690 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A YJL055WP47044 245 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A ABM1P47146 123 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A YGR018CP53211 109 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A RRP46P53256 223 aaPredicted RBP2.47□□□□□ -2.01
YGR109W-AYGR109W-A ASA1Q06822 443 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A YOP1Q12402 180 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A CEX1Q12453 761 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A YCR024C-BQ3E7Z8 88 aa2.47□□□□□ -2.01
YGR109W-AYGR109W-A ADH1P00330 348 aaKnown RBP2.46□□□□□ -2.02
YGR109W-AYGR109W-A PAB1P04147 577 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
YGR109W-AYGR109W-A TPK3P05986 398 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A CBP6P07253 162 aaPredicted RBP2.46□□□□□ -2.02
YGR109W-AYGR109W-A PRB1P09232 635 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A MDL1P33310 695 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A SPP381P38282 291 aaPredicted RBP2.46□□□□□ -2.02
YGR109W-AYGR109W-A ALD5P40047 520 aaKnown RBP2.46□□□□□ -2.02
YGR109W-AYGR109W-A MAM33P40513 266 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A PAC11P40960 533 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A YPS5P53057 165 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A VPS9P54787 451 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A NAG1Q8TGN9 163 aa2.46□□□□□ -2.02
YGR109W-AYGR109W-A ARF1P11076 181 aaKnown RBP2.45□□□□□ -2.02
YGR109W-AYGR109W-A TIR2P33890 251 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A SKT5P34226 696 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A DOA1P36037 715 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A MCR1P36060 302 aaKnown RBP2.45□□□□□ -2.02
YGR109W-AYGR109W-A ECM8P38246 354 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A GEP4P38812 185 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A RTT102P53330 157 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A YDR541CQ03049 344 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A PRP3Q03338 469 aaPredicted RBP2.45□□□□□ -2.02
YGR109W-AYGR109W-A YPR091CQ06833 770 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A LOT6Q07923 191 aa2.45□□□□□ -2.02
YGR109W-AYGR109W-A PEX5P35056 612 aa2.44□□□□□ -2.02
YGR109W-AYGR109W-A GPI18P38211 433 aa2.44□□□□□ -2.02
YGR109W-AYGR109W-A CLD1P53264 445 aa2.44□□□□□ -2.02
YGR109W-AYGR109W-A SXM1Q04175 944 aaKnown RBP2.44□□□□□ -2.02
YGR109W-AYGR109W-A NOP6Q07623 225 aaKnown RBP2.44□□□□□ -2.02
YGR109W-AYGR109W-A LDS2Q08218 356 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms