RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C ENT2Q05785 613 aa10.08□□□□□ -0.8
SPC25YER018C CSF1Q12150 2958 aa10.08□□□□□ -0.8
SPC25YER018C RPL40AP0CH08 128 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C RPL40BP0CH09 128 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C CBS1P14066 229 aa10.07□□□□□ -0.8
SPC25YER018C THR1P17423 357 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C FAR1P21268 830 aa10.07□□□□□ -0.8
SPC25YER018C MCK1P21965 375 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C IDH1P28834 360 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
SPC25YER018C SSE2P32590 693 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C WBP1P33767 430 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C TOD6P34219 525 aa10.07□□□□□ -0.8
SPC25YER018C ICE2P40499 491 aa10.07□□□□□ -0.8
SPC25YER018C MPH1P40562 993 aa10.07□□□□□ -0.8
SPC25YER018C ALB1P47019 175 aaPredicted RBP10.07□□□□□ -0.8
SPC25YER018C BIT61P47041 543 aa10.07□□□□□ -0.8
SPC25YER018C MON1P53129 644 aa10.07□□□□□ -0.8
SPC25YER018C PRM8P53174 237 aa10.07□□□□□ -0.8
SPC25YER018C TPC1P53257 314 aa10.07□□□□□ -0.8
SPC25YER018C SNP1Q00916 300 aaPredicted RBP10.07□□□□□ -0.8
SPC25YER018C YOL073CQ08232 322 aa10.07□□□□□ -0.8
SPC25YER018C YOR365CQ08844 703 aa10.07□□□□□ -0.8
SPC25YER018C NKP1Q12493 238 aa10.07□□□□□ -0.8
SPC25YER018C YIL046W-AQ3E7Z4 54 aa10.07□□□□□ -0.8
SPC25YER018C CYR1P08678 2026 aaKnown RBP10.07□□□□□ -0.8
SPC25YER018C IRA2P19158 3079 aa10.06□□□□□ -0.8
SPC25YER018C CYS4P32582 507 aaKnown RBP10.06□□□□□ -0.8
SPC25YER018C RIM101P33400 625 aa10.06□□□□□ -0.8
SPC25YER018C COG3P40094 801 aa10.06□□□□□ -0.8
SPC25YER018C RIO2P40160 425 aaKnown RBP10.06□□□□□ -0.8
SPC25YER018C SNM1P40993 198 aa10.06□□□□□ -0.8
SPC25YER018C APS3P47064 194 aa10.06□□□□□ -0.8
SPC25YER018C ASK10P48361 1146 aa10.06□□□□□ -0.8
SPC25YER018C DAM1P53267 343 aa10.06□□□□□ -0.8
SPC25YER018C SYF2P53277 215 aaPredicted RBP10.06□□□□□ -0.8
SPC25YER018C CTL1Q03220 320 aaKnown RBP10.06□□□□□ -0.8
SPC25YER018C SMA2Q04658 369 aa10.06□□□□□ -0.8
SPC25YER018C VPS36Q06696 566 aa10.06□□□□□ -0.8
SPC25YER018C RIB3Q99258 208 aa10.06□□□□□ -0.8
SPC25YER018C GPI12P23797 304 aa10.05□□□□□ -0.8
SPC25YER018C YOR062CP36025 268 aa10.05□□□□□ -0.8
SPC25YER018C IFA38P38286 347 aa10.05□□□□□ -0.8
SPC25YER018C SPO73P40031 143 aa10.05□□□□□ -0.8
SPC25YER018C SPT20P50875 604 aa10.05□□□□□ -0.8
SPC25YER018C RNH70P53331 553 aa10.05□□□□□ -0.8
SPC25YER018C YMR099CQ03161 297 aaKnown RBP10.05□□□□□ -0.8
SPC25YER018C INP1Q03694 420 aa10.05□□□□□ -0.8
SPC25YER018C RNH202Q05635 350 aa10.05□□□□□ -0.8
SPC25YER018C MOD5P07884 428 aa10.04□□□□□ -0.8
SPC25YER018C FAA1P30624 700 aaKnown RBP10.04□□□□□ -0.8
SPC25YER018C ECM34P38728 170 aa10.04□□□□□ -0.8
SPC25YER018C MBP1P39678 833 aa10.04□□□□□ -0.8
SPC25YER018C EMC2P47133 292 aaKnown RBP10.04□□□□□ -0.8
SPC25YER018C NUP57P48837 541 aa10.04□□□□□ -0.8
SPC25YER018C YGR168CP53293 376 aa10.04□□□□□ -0.8
SPC25YER018C NBA1Q08229 501 aaKnown RBP10.04□□□□□ -0.8
SPC25YER018C KSS1P14681 368 aa10.03□□□□□ -0.8
SPC25YER018C SAC7P17121 654 aa10.03□□□□□ -0.8
SPC25YER018C STE4P18851 423 aa10.03□□□□□ -0.8
SPC25YER018C RHB1P25378 209 aa10.03□□□□□ -0.8
SPC25YER018C MKK2P32491 506 aa10.03□□□□□ -0.8
SPC25YER018C TIF3P34167 436 aaKnown RBP10.03□□□□□ -0.8
SPC25YER018C YBR285WP38354 144 aa10.03□□□□□ -0.8
SPC25YER018C LEU5P38702 357 aa10.03□□□□□ -0.8
SPC25YER018C TAT2P38967 592 aa10.03□□□□□ -0.8
SPC25YER018C RCY1P39531 840 aa10.03□□□□□ -0.8
SPC25YER018C PZF1P39933 429 aa10.03□□□□□ -0.8
SPC25YER018C YJR141WP47172 347 aaPredicted RBP10.03□□□□□ -0.8
SPC25YER018C PMT3P47190 753 aa10.03□□□□□ -0.8
SPC25YER018C YPL068CQ02749 293 aa10.03□□□□□ -0.8
SPC25YER018C YPL066WQ12194 479 aa10.03□□□□□ -0.8
SPC25YER018C NFI1Q12216 726 aa10.03□□□□□ -0.8
SPC25YER018C SIR3P06701 978 aa10.02□□□□□ -0.81
SPC25YER018C YSF3P0C074 85 aaPredicted RBP10.02□□□□□ -0.81
SPC25YER018C CDC26P14724 124 aa10.02□□□□□ -0.81
SPC25YER018C RRP7P25368 297 aaPredicted RBP10.02□□□□□ -0.81
SPC25YER018C HBS1P32769 611 aaKnown RBP10.02□□□□□ -0.81
SPC25YER018C ECM8P38246 354 aa10.02□□□□□ -0.81
SPC25YER018C EXO84P38261 753 aa10.02□□□□□ -0.81
SPC25YER018C ANS1P38832 159 aa10.02□□□□□ -0.81
SPC25YER018C TDA11P38854 504 aa10.02□□□□□ -0.81
SPC25YER018C LEM3P42838 414 aa10.02□□□□□ -0.81
SPC25YER018C YJR115WP47152 169 aa10.02□□□□□ -0.81
SPC25YER018C TOS2P50078 622 aa10.02□□□□□ -0.81
SPC25YER018C MPC1P53157 130 aaKnown RBP10.02□□□□□ -0.81
SPC25YER018C YGR067CP53243 804 aa10.02□□□□□ -0.81
SPC25YER018C MEP3P53390 489 aa10.02□□□□□ -0.81
SPC25YER018C DBP6P53734 629 aaKnown RBP10.02□□□□□ -0.81
SPC25YER018C SWP1Q02795 286 aa10.02□□□□□ -0.81
SPC25YER018C YDR541CQ03049 344 aa10.02□□□□□ -0.81
SPC25YER018C TRS23Q03784 219 aa10.02□□□□□ -0.81
SPC25YER018C PSF1Q12488 208 aa10.02□□□□□ -0.81
SPC25YER018C MHF1Q3E835 90 aa10.02□□□□□ -0.81
SPC25YER018C RPL17AP05740 184 aaKnown RBP10.01□□□□□ -0.81
SPC25YER018C RPC40P07703 335 aaKnown RBP10.01□□□□□ -0.81
SPC25YER018C RPL20AP0CX23 172 aaKnown RBP10.01□□□□□ -0.81
SPC25YER018C RPL20BP0CX24 172 aaPredicted RBP10.01□□□□□ -0.81
SPC25YER018C HOM3P10869 527 aa10.01□□□□□ -0.81
SPC25YER018C GLK1P17709 500 aaKnown RBP10.01□□□□□ -0.81
SPC25YER018C RPC82P32349 654 aa10.01□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms