RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	AIM33	Q04516	312 aa		5.25	□□□□□ -1.57
YEF1	YEL041W	YLR112W	Q12130	139 aa		5.25	□□□□□ -1.57
YEF1	YEL041W	TIP41	Q12199	356 aa		5.25	□□□□□ -1.57
YEF1	YEL041W	RUP1	Q12242	671 aa		5.25	□□□□□ -1.57
YEF1	YEL041W	TDH1	P00360	332 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	ILV1	P00927	576 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	TUB1	P09733	447 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	RPI1	P23250	407 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	YCR007C	P25354	239 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	SPS22	P25380	463 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	KRE6	P32486	720 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	STN1	P38960	494 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	PCF11	P39081	626 aa	Predicted RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	GAT2	P40209	560 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	ELP2	P42935	788 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	PHO86	P46956	311 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	EFM3	P47163	339 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	EFM5	P53200	248 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	YIF1	P53845	314 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	YDR387C	Q04162	555 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	MOT1	P32333	1867 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	FKS1	P38631	1876 aa	Known RBP	5.24	□□□□□ -1.57
YEF1	YEL041W	YPR117W	Q06116	2489 aa		5.24	□□□□□ -1.57
YEF1	YEL041W	ILV5	P06168	395 aa	Known RBP	5.23	□□□□□ -1.57
YEF1	YEL041W	MSS116	P15424	664 aa	Known RBP	5.23	□□□□□ -1.57
YEF1	YEL041W	VPS1	P21576	704 aa	Known RBP	5.23	□□□□□ -1.57
YEF1	YEL041W	MBR1	P23493	339 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	PPZ1	P26570	692 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	APE2	P32454	952 aa	Known RBP	5.23	□□□□□ -1.57
YEF1	YEL041W	RRP4	P38792	359 aa	Known RBP	5.23	□□□□□ -1.57
YEF1	YEL041W	MNL1	P38888	796 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	CFD1	P40558	293 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	IAH1	P41734	238 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	YNL181W	P53878	407 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	MRPL1	Q04599	285 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	ECI1	Q05871	280 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	ARR1	Q06596	294 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	YLR413W	Q06689	675 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	YPL150W	Q12152	901 aa		5.23	□□□□□ -1.57
YEF1	YEL041W	SCH9	P11792	824 aa	Known RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	CLN3	P13365	580 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	RDS1	P25611	832 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	ASF2	P32448	525 aa	Predicted RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	PDR3	P33200	976 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	BUD2	P33314	1104 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	YPK3	P38070	525 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	SCO2	P38072	301 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	SLX1	P38324	304 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	GPI16	P38875	610 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	UTP18	P40362	594 aa	Predicted RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	FIS1	P40515	155 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	RTS2	P40962	232 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	TRS85	P46944	698 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	PRM1	P53835	661 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	RTC4	P53850	401 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	ERG13	P54839	491 aa	Known RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	REX2	P54964	269 aa	Known RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	UTP6	Q02354	440 aa	Known RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	RRB1	Q04225	511 aa	Known RBP	5.22	□□□□□ -1.57
YEF1	YEL041W	MSC3	Q05812	728 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	IPK1	Q06667	281 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	NSE1	Q07913	336 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	SMC5	Q08204	1093 aa		5.22	□□□□□ -1.57
YEF1	YEL041W	HIS4	P00815	799 aa	Known RBP	5.21	□□□□□ -1.58
YEF1	YEL041W	STE3	P06783	470 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	ECM25	P32525	599 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	KAP104	P38217	918 aa	Known RBP	5.21	□□□□□ -1.58
YEF1	YEL041W	SPC97	P38863	823 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	TVP23	P38962	199 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	YIL024C	P40543	189 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
YEF1	YEL041W	IZH1	Q03419	316 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	FUS2	Q05670	677 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	RKM5	Q12367	367 aa		5.21	□□□□□ -1.58
YEF1	YEL041W	NFT1	P0CE68	1218 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	YAP1	P19880	650 aa	Known RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	BUB3	P26449	341 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
YEF1	YEL041W	TCD1	P38756	429 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	YIR014W	P40570	242 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	GAT1	P43574	510 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	BRO1	P48582	844 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	SAM50	P53969	484 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	ABZ2	Q03266	374 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	TAF12	Q03761	539 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	MSS11	Q03825	758 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	NRT1	Q08485	598 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	LSP1	Q12230	341 aa	Known RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	RBD2	Q12270	262 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	CRC1	Q12289	327 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	RIF1	P29539	1916 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	CDC21	P06785	304 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	CAR2	P07991	424 aa	Known RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	TCP1	P12612	559 aa	Known RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	GCD2	P12754	651 aa	Predicted RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	CKA2	P19454	339 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	EXO70	P19658	623 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	CYS4	P32582	507 aa	Known RBP	5.2	□□□□□ -1.58
YEF1	YEL041W	COT1	P32798	439 aa		5.2	□□□□□ -1.58
YEF1	YEL041W	SPC34	P36131	295 aa		5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms