RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SUI1P32911 108 aaKnown RBP4.06□□□□□ -1.76
SPT3YDR392W AIM18P38884 321 aa4.06□□□□□ -1.76
SPT3YDR392W PSD1P39006 500 aa4.06□□□□□ -1.76
SPT3YDR392W VRG4P40107 337 aa4.06□□□□□ -1.76
SPT3YDR392W RPL10P41805 221 aaKnown RBP4.06□□□□□ -1.76
SPT3YDR392W PUS4P48567 403 aaKnown RBP4.06□□□□□ -1.76
SPT3YDR392W AAT1Q01802 451 aa4.06□□□□□ -1.76
SPT3YDR392W SDC1Q03323 175 aa4.06□□□□□ -1.76
SPT3YDR392W RSM28Q03430 361 aa4.06□□□□□ -1.76
SPT3YDR392W EBS1Q03466 884 aaKnown RBP4.06□□□□□ -1.76
SPT3YDR392W YMR111CQ04461 462 aaPredicted RBP4.06□□□□□ -1.76
SPT3YDR392W BOP2Q06150 570 aa4.06□□□□□ -1.76
SPT3YDR392W MFG1Q07684 458 aa4.06□□□□□ -1.76
SPT3YDR392W AAD15Q08361 143 aa4.06□□□□□ -1.76
SPT3YDR392W ATG29Q12092 213 aa4.06□□□□□ -1.76
SPT3YDR392W NOP58Q12499 511 aaKnown RBP4.06□□□□□ -1.76
SPT3YDR392W IZH4Q99393 312 aa4.06□□□□□ -1.76
SPT3YDR392W COR1P07256 457 aa4.05□□□□□ -1.76
SPT3YDR392W CDC33P07260 213 aaKnown RBP4.05□□□□□ -1.76
SPT3YDR392W YHR214C-DP0CX93 97 aa4.05□□□□□ -1.76
SPT3YDR392W AIM17P23180 465 aaKnown RBP4.05□□□□□ -1.76
SPT3YDR392W URE2P23202 354 aaKnown RBP4.05□□□□□ -1.76
SPT3YDR392W DAL80P26343 269 aa4.05□□□□□ -1.76
SPT3YDR392W CNE1P27825 502 aa4.05□□□□□ -1.76
SPT3YDR392W ITR1P30605 584 aa4.05□□□□□ -1.76
SPT3YDR392W THI4P32318 326 aa4.05□□□□□ -1.76
SPT3YDR392W MET30P39014 640 aa4.05□□□□□ -1.76
SPT3YDR392W TMN3P40071 706 aa4.05□□□□□ -1.76
SPT3YDR392W EGT2P42835 1041 aa4.05□□□□□ -1.76
SPT3YDR392W OSW7P43611 510 aa4.05□□□□□ -1.76
SPT3YDR392W NUP100Q02629 959 aa4.05□□□□□ -1.76
SPT3YDR392W RAD30Q04049 632 aa4.05□□□□□ -1.76
SPT3YDR392W MRPL1Q04599 285 aa4.05□□□□□ -1.76
SPT3YDR392W ATG9Q12142 997 aa4.05□□□□□ -1.76
SPT3YDR392W YOR019WQ99248 730 aa4.05□□□□□ -1.76
SPT3YDR392W ERD1P16151 362 aa4.04□□□□□ -1.76
SPT3YDR392W SWC5P38326 303 aa4.04□□□□□ -1.76
SPT3YDR392W DPB11P47027 764 aaPredicted RBP4.04□□□□□ -1.76
SPT3YDR392W SAL1D6W196 494 aa4.03□□□□□ -1.76
SPT3YDR392W BI2P03873 423 aa4.03□□□□□ -1.76
SPT3YDR392W CDC21P06785 304 aa4.03□□□□□ -1.76
SPT3YDR392W AQY1P0CD91 305 aa4.03□□□□□ -1.76
SPT3YDR392W RRN3P36070 627 aa4.03□□□□□ -1.76
SPT3YDR392W OTU2P38747 307 aaKnown RBP4.03□□□□□ -1.76
SPT3YDR392W BUD8P41698 603 aa4.03□□□□□ -1.76
SPT3YDR392W IDP2P41939 412 aa4.03□□□□□ -1.76
SPT3YDR392W KAP114P53067 1004 aa4.03□□□□□ -1.76
SPT3YDR392W BI3Q9ZZW7 517 aa4.03□□□□□ -1.76
SPT3YDR392W NAM2P11325 894 aa4.02□□□□□ -1.77
SPT3YDR392W YCP4P25349 247 aaKnown RBP4.02□□□□□ -1.77
SPT3YDR392W ERG1P32476 496 aaKnown RBP4.02□□□□□ -1.77
SPT3YDR392W GCG1P32656 232 aaKnown RBP4.02□□□□□ -1.77
SPT3YDR392W TIP20P33891 701 aa4.02□□□□□ -1.77
SPT3YDR392W MRPL39P36533 70 aa4.02□□□□□ -1.77
SPT3YDR392W SCW4P53334 386 aaKnown RBP4.02□□□□□ -1.77
SPT3YDR392W JJJ1P53863 590 aa4.02□□□□□ -1.77
SPT3YDR392W IDP3P53982 420 aaKnown RBP4.02□□□□□ -1.77
SPT3YDR392W YPL108WQ02872 168 aaPredicted RBP4.02□□□□□ -1.77
SPT3YDR392W RSC9Q03124 581 aa4.02□□□□□ -1.77
SPT3YDR392W YTH1Q06102 208 aaPredicted RBP4.02□□□□□ -1.77
SPT3YDR392W TGS1Q12052 315 aa4.02□□□□□ -1.77
SPT3YDR392W BRR1Q99177 341 aaPredicted RBP4.02□□□□□ -1.77
SPT3YDR392W EST1P17214 699 aaPredicted RBP4.01□□□□□ -1.77
SPT3YDR392W MEI4P29467 408 aa4.01□□□□□ -1.77
SPT3YDR392W ZIP1P31111 875 aa4.01□□□□□ -1.77
SPT3YDR392W AUA1P32450 94 aa4.01□□□□□ -1.77
SPT3YDR392W ASK1P35734 292 aa4.01□□□□□ -1.77
SPT3YDR392W MAK5P38112 773 aaPredicted RBP4.01□□□□□ -1.77
SPT3YDR392W YER121WP40076 114 aa4.01□□□□□ -1.77
SPT3YDR392W DJP1P40564 432 aa4.01□□□□□ -1.77
SPT3YDR392W REE1P40893 198 aa4.01□□□□□ -1.77
SPT3YDR392W STE24P47154 453 aa4.01□□□□□ -1.77
SPT3YDR392W YGR054WP53235 642 aaKnown RBP4.01□□□□□ -1.77
SPT3YDR392W BUD32P53323 261 aa4.01□□□□□ -1.77
SPT3YDR392W BUD17P53727 317 aa4.01□□□□□ -1.77
SPT3YDR392W HLR1Q04429 423 aa4.01□□□□□ -1.77
SPT3YDR392W PSK2Q08217 1101 aa4.01□□□□□ -1.77
SPT3YDR392W SRL1Q08673 210 aa4.01□□□□□ -1.77
SPT3YDR392W YAP1P19880 650 aaKnown RBP4□□□□□ -1.77
SPT3YDR392W TOM20P35180 183 aa4□□□□□ -1.77
SPT3YDR392W NDE1P40215 560 aa4□□□□□ -1.77
SPT3YDR392W KEL2P50090 882 aa4□□□□□ -1.77
SPT3YDR392W ROG1P53118 685 aa4□□□□□ -1.77
SPT3YDR392W MPS2P53159 387 aa4□□□□□ -1.77
SPT3YDR392W YNL247WP53852 767 aaKnown RBP4□□□□□ -1.77
SPT3YDR392W KTR5P53966 522 aaPredicted RBP4□□□□□ -1.77
SPT3YDR392W YLR460CP54007 376 aa4□□□□□ -1.77
SPT3YDR392W SKO1Q02100 647 aa4□□□□□ -1.77
SPT3YDR392W MET14Q02196 202 aa4□□□□□ -1.77
SPT3YDR392W IVY1Q04934 453 aa4□□□□□ -1.77
SPT3YDR392W SEI1Q06058 285 aa4□□□□□ -1.77
SPT3YDR392W DBP10Q12389 995 aaKnown RBP4□□□□□ -1.77
SPT3YDR392W CDC15P27636 974 aa3.99□□□□□ -1.77
SPT3YDR392W BMH1P29311 267 aaKnown RBP3.99□□□□□ -1.77
SPT3YDR392W PRE4P30657 266 aa3.99□□□□□ -1.77
SPT3YDR392W SSE1P32589 693 aaKnown RBP3.99□□□□□ -1.77
SPT3YDR392W HCS1P34243 683 aa3.99□□□□□ -1.77
SPT3YDR392W VPS24P36095 224 aaKnown RBP3.99□□□□□ -1.77
SPT3YDR392W INM1P38710 295 aa3.99□□□□□ -1.77
SPT3YDR392W LSC1P53598 329 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms