RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	DAD2	P36162	133 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	MRPL10	P36520	322 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	LCB3	P47013	409 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	AIM24	P47127	394 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	YPL107W	Q02873	248 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	YMR102C	Q03177	834 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	PRM6	Q04705	352 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	LDS2	Q08218	356 aa		3.98	□□□□□ -1.77
NSE3	YDR288W	SPT7	P35177	1332 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	ADH2	P00331	348 aa	Known RBP	3.97	□□□□□ -1.77
NSE3	YDR288W	NAT1	P12945	854 aa	Known RBP	3.97	□□□□□ -1.77
NSE3	YDR288W	PHO84	P25297	587 aa	Known RBP	3.97	□□□□□ -1.77
NSE3	YDR288W	YEL045C	P32616	141 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	SWD3	P38123	315 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	YFR057W	P43625	151 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	CUE5	Q08412	411 aa	Known RBP	3.97	□□□□□ -1.77
NSE3	YDR288W	YGK3	Q12222	375 aa	Predicted RBP	3.97	□□□□□ -1.77
NSE3	YDR288W	HRT3	Q12347	344 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	AHC1	Q12433	566 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	SKS1	Q12505	502 aa		3.97	□□□□□ -1.77
NSE3	YDR288W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	RIP-Chip
NSE3	YDR288W	SSC1	P0CS90	654 aa	Known RBP	3.96	□□□□□ -1.78
NSE3	YDR288W	REV1	P12689	985 aa		3.96	□□□□□ -1.78
NSE3	YDR288W	RAD5	P32849	1169 aa	Predicted RBP	3.96	□□□□□ -1.78
NSE3	YDR288W	MCR1	P36060	302 aa	Known RBP	3.96	□□□□□ -1.78
NSE3	YDR288W	YSW1	P38280	609 aa		3.96	□□□□□ -1.78
NSE3	YDR288W	GEP4	P38812	185 aa		3.96	□□□□□ -1.78
NSE3	YDR288W	YJR085C	P47131	105 aa	Known RBP	3.96	□□□□□ -1.78
NSE3	YDR288W	PMT5	P52867	743 aa		3.96	□□□□□ -1.78
NSE3	YDR288W	SDT1	P53078	280 aa		3.96	□□□□□ -1.78
NSE3	YDR288W	RTN1	Q04947	295 aa	Known RBP	3.96	□□□□□ -1.78
NSE3	YDR288W	MSI1	P13712	422 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	DPH5	P32469	300 aa	Predicted RBP	3.95	□□□□□ -1.78
NSE3	YDR288W	LAS1	P36146	502 aa	Predicted RBP	3.95	□□□□□ -1.78
NSE3	YDR288W	ECM8	P38246	354 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	RIF2	Q06208	395 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	NFI1	Q12216	726 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	JID1	Q12350	301 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	IZH2	Q12442	317 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	YCR024C-B	Q3E7Z8	88 aa		3.95	□□□□□ -1.78
NSE3	YDR288W	SPT10	P35208	640 aa		3.94	□□□□□ -1.78
NSE3	YDR288W	YHR131C	P38835	850 aa		3.94	□□□□□ -1.78
NSE3	YDR288W	PEX27	Q08580	376 aa		3.94	□□□□□ -1.78
NSE3	YDR288W	SMF3	Q12078	473 aa	Predicted RBP	3.94	□□□□□ -1.78
NSE3	YDR288W	WTM1	Q12363	437 aa	Known RBP	3.94	□□□□□ -1.78
NSE3	YDR288W	OPI1	P21957	404 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	YOX1	P34161	385 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	GPX2	P38143	162 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	BIR1	P47134	954 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	TOS2	P50078	622 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	YMR010W	Q03687	405 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	FDH1	Q08911	376 aa		3.93	□□□□□ -1.78
NSE3	YDR288W	TIR2	P33890	251 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	YHK8	P38776	514 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	YHR177W	P38867	453 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	AIM10	P39965	576 aa	Known RBP	3.92	□□□□□ -1.78
NSE3	YDR288W	YNL208W	P40159	199 aa	Known RBP	3.92	□□□□□ -1.78
NSE3	YDR288W	SNL1	P40548	159 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	MST27	P53176	234 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	CLD1	P53264	445 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	TDA1	Q03533	586 aa		3.92	□□□□□ -1.78
NSE3	YDR288W	RNA1	P11745	407 aa	Known RBP	3.91	□□□□□ -1.78
NSE3	YDR288W	SCH9	P11792	824 aa	Known RBP	3.91	□□□□□ -1.78
NSE3	YDR288W	RPB5	P20434	215 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	ISY1	P21374	235 aa	Predicted RBP	3.91	□□□□□ -1.78
NSE3	YDR288W	PRR1	P28708	518 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	FAA1	P30624	700 aa	Known RBP	3.91	□□□□□ -1.78
NSE3	YDR288W	SDS24	P38314	527 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	MPS2	P53159	387 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	YMR027W	Q04371	470 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	YPR091C	Q06833	770 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	TMC1	Q08422	150 aa	Predicted RBP	3.91	□□□□□ -1.78
NSE3	YDR288W	RBD2	Q12270	262 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	PCL9	Q12477	304 aa		3.91	□□□□□ -1.78
NSE3	YDR288W	DAP2	P18962	818 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	MRPL8	P22353	238 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	UBA1	P22515	1024 aa	Known RBP	3.9	□□□□□ -1.79
NSE3	YDR288W	LDB16	P25587	256 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	RTC2	P38279	296 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	PRE5	P40302	234 aa	Known RBP	3.9	□□□□□ -1.79
NSE3	YDR288W	SHY1	P53266	389 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	RRN9	P53437	365 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	COS1	P53822	381 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	FCY22	Q12119	530 aa		3.9	□□□□□ -1.79
NSE3	YDR288W	MEX67	Q99257	599 aa	Known RBP	3.9	□□□□□ -1.79
NSE3	YDR288W	AAT2	P23542	418 aa	Known RBP	3.89	□□□□□ -1.79
NSE3	YDR288W	PSO2	P30620	661 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	ADH5	P38113	351 aa	Known RBP	3.89	□□□□□ -1.79
NSE3	YDR288W	SEC27	P41811	889 aa	Known RBP	3.89	□□□□□ -1.79
NSE3	YDR288W	SHE10	P53075	577 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	CRH1	P53301	507 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	YNR068C	P53754	272 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	LIP2	Q06005	328 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	CMS1	Q07897	291 aa	Known RBP	3.89	□□□□□ -1.79
NSE3	YDR288W	PLP2	Q12017	286 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	GLE1	Q12315	538 aa		3.89	□□□□□ -1.79
NSE3	YDR288W	MSK1	P32048	576 aa		3.88	□□□□□ -1.79
NSE3	YDR288W	OXA1	P39952	402 aa		3.88	□□□□□ -1.79
NSE3	YDR288W	LYS12	P40495	371 aa	Known RBP	3.88	□□□□□ -1.79
NSE3	YDR288W	EGT2	P42835	1041 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms