RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C CSF1Q12150 2958 aa0.77□□□□□ -2.29
SEC1YDR164C TAO3P40468 2376 aa0.76□□□□□ -2.29
SEC1YDR164C YER145C-AA0A023PYF4 145 aa0.76□□□□□ -2.29
SEC1YDR164C HXK2P04807 486 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C ARG81P05085 880 aa0.76□□□□□ -2.29
SEC1YDR164C HIP1P06775 603 aa0.76□□□□□ -2.29
SEC1YDR164C PUT2P07275 575 aa0.76□□□□□ -2.29
SEC1YDR164C MSF1P08425 469 aa0.76□□□□□ -2.29
SEC1YDR164C ASP3-2P0CX77 362 aa0.76□□□□□ -2.29
SEC1YDR164C ASP3-3P0CX78 362 aa0.76□□□□□ -2.29
SEC1YDR164C ASP3-4P0CX79 362 aa0.76□□□□□ -2.29
SEC1YDR164C ASP3-1P0CZ17 362 aa0.76□□□□□ -2.29
SEC1YDR164C PMR1P13586 950 aa0.76□□□□□ -2.29
SEC1YDR164C MDH1P17505 334 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
SEC1YDR164C CPR2P23285 205 aa0.76□□□□□ -2.29
SEC1YDR164C KRR1P25586 316 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C IMG1P25626 169 aa0.76□□□□□ -2.29
SEC1YDR164C UBC8P28263 218 aa0.76□□□□□ -2.29
SEC1YDR164C RAD14P28519 371 aa0.76□□□□□ -2.29
SEC1YDR164C NDI1P32340 513 aa0.76□□□□□ -2.29
SEC1YDR164C SAC1P32368 623 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C RNP1P32385 249 aa0.76□□□□□ -2.29
SEC1YDR164C RML2P32611 393 aa0.76□□□□□ -2.29
SEC1YDR164C TFB1P32776 642 aa0.76□□□□□ -2.29
SEC1YDR164C FRE1P32791 686 aa0.76□□□□□ -2.29
SEC1YDR164C RAD5P32849 1169 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C RPS0AP32905 252 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C GDH2P33327 1092 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C NUF2P33895 451 aa0.76□□□□□ -2.29
SEC1YDR164C SRB2P34162 210 aa0.76□□□□□ -2.29
SEC1YDR164C YBR144CP34215 104 aa0.76□□□□□ -2.29
SEC1YDR164C LHS1P36016 881 aa0.76□□□□□ -2.29
SEC1YDR164C ECM4P36156 370 aa0.76□□□□□ -2.29
SEC1YDR164C TVP38P36164 337 aa0.76□□□□□ -2.29
SEC1YDR164C APE3P37302 537 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C TSC10P38342 320 aa0.76□□□□□ -2.29
SEC1YDR164C SHC1P39000 512 aa0.76□□□□□ -2.29
SEC1YDR164C ALG5P40350 334 aa0.76□□□□□ -2.29
SEC1YDR164C AIM20P40451 204 aa0.76□□□□□ -2.29
SEC1YDR164C HPM1P40481 377 aa0.76□□□□□ -2.29
SEC1YDR164C YIL001WP40560 513 aa0.76□□□□□ -2.29
SEC1YDR164C FMP32P43557 207 aa0.76□□□□□ -2.29
SEC1YDR164C CAK1P43568 368 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C RPS10BP46784 105 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C AIM22P47051 409 aa0.76□□□□□ -2.29
SEC1YDR164C ILM1P47155 203 aa0.76□□□□□ -2.29
SEC1YDR164C COS5P47187 383 aa0.76□□□□□ -2.29
SEC1YDR164C YDL186WP48568 277 aa0.76□□□□□ -2.29
SEC1YDR164C RPS12P48589 143 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C YPT32P51996 222 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C AIF1P52923 378 aa0.76□□□□□ -2.29
SEC1YDR164C COS6P53344 381 aa0.76□□□□□ -2.29
SEC1YDR164C OGG1P53397 376 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C YTP1P53584 459 aa0.76□□□□□ -2.29
SEC1YDR164C TRM112P53738 135 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C IST1P53843 298 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C ALG11P53954 548 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C KTR5P53966 522 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C TIM11P81449 96 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C PEX25Q02969 394 aa0.76□□□□□ -2.29
SEC1YDR164C EKI1Q03764 534 aa0.76□□□□□ -2.29
SEC1YDR164C GRX3Q03835 250 aa0.76□□□□□ -2.29
SEC1YDR164C PRM6Q04705 352 aa0.76□□□□□ -2.29
SEC1YDR164C YMR321CQ04898 105 aa0.76□□□□□ -2.29
SEC1YDR164C YDR222WQ04925 415 aa0.76□□□□□ -2.29
SEC1YDR164C YLR177WQ06251 628 aa0.76□□□□□ -2.29
SEC1YDR164C NDL1Q06568 189 aa0.76□□□□□ -2.29
SEC1YDR164C ASA1Q06822 443 aa0.76□□□□□ -2.29
SEC1YDR164C NOP6Q07623 225 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C TEN1Q07921 160 aa0.76□□□□□ -2.29
SEC1YDR164C CUE5Q08412 411 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C RPN8Q08723 338 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C RPS10AQ08745 105 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C THP3Q12049 470 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C SPE3Q12074 293 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C SMF3Q12078 473 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C CFT2Q12102 859 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C LEU9Q12166 604 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C NFI1Q12216 726 aa0.76□□□□□ -2.29
SEC1YDR164C GPM3Q12326 303 aa0.76□□□□□ -2.29
SEC1YDR164C NCA2Q12374 616 aa0.76□□□□□ -2.29
SEC1YDR164C ERP3Q12403 225 aa0.76□□□□□ -2.29
SEC1YDR164C YDL007C-AQ2V2Q0 85 aa0.76□□□□□ -2.29
SEC1YDR164C EFG1Q3E705 233 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C SRN2Q99176 213 aa0.76□□□□□ -2.29
SEC1YDR164C BRR1Q99177 341 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C BI3Q9ZZW7 517 aa0.76□□□□□ -2.29
SEC1YDR164C USO1P25386 1790 aa0.76□□□□□ -2.29
SEC1YDR164C COX5AP00424 153 aa0.76□□□□□ -2.29
SEC1YDR164C CHS1P08004 1131 aa0.76□□□□□ -2.29
SEC1YDR164C MAS1P10507 462 aa0.76□□□□□ -2.29
SEC1YDR164C AMD1P15274 810 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C POL30P15873 258 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C MET16P18408 261 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C CKA2P19454 339 aa0.76□□□□□ -2.29
SEC1YDR164C CCA1P21269 546 aa0.76□□□□□ -2.29
SEC1YDR164C PPH22P23595 377 aa0.76□□□□□ -2.29
SEC1YDR164C VPS3P23643 1011 aa0.76□□□□□ -2.29
SEC1YDR164C CLB2P24869 491 aa0.76□□□□□ -2.29
SEC1YDR164C SPS22P25380 463 aa0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms