RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C ATP1P07251 545 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C RNA1P11745 407 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C PRS1P32895 427 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C MCR1P36060 302 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C BAT1P38891 393 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C ATG18P43601 500 aa1.54□□□□□ -2.16
SWI5YDR146C LCB3P47013 409 aa1.54□□□□□ -2.16
SWI5YDR146C YJL055WP47044 245 aa1.54□□□□□ -2.16
SWI5YDR146C PIB2P53191 635 aa1.54□□□□□ -2.16
SWI5YDR146C RTT102P53330 157 aa1.54□□□□□ -2.16
SWI5YDR146C YMR102CQ03177 834 aa1.54□□□□□ -2.16
SWI5YDR146C RTN1Q04947 295 aaKnown RBP1.54□□□□□ -2.16
SWI5YDR146C NDE2Q07500 545 aa1.54□□□□□ -2.16
SWI5YDR146C SMF3Q12078 473 aaPredicted RBP1.54□□□□□ -2.16
SWI5YDR146C YCR024C-BQ3E7Z8 88 aa1.54□□□□□ -2.16
SWI5YDR146C MNE1P24720 663 aa1.53□□□□□ -2.16
SWI5YDR146C FUN26P31381 517 aa1.53□□□□□ -2.16
SWI5YDR146C PEX5P35056 612 aa1.53□□□□□ -2.16
SWI5YDR146C PFF1P38244 976 aa1.53□□□□□ -2.16
SWI5YDR146C YHR177WP38867 453 aa1.53□□□□□ -2.16
SWI5YDR146C MIG3P39943 394 aa1.53□□□□□ -2.16
SWI5YDR146C EGT2P42835 1041 aa1.53□□□□□ -2.16
SWI5YDR146C MLC1P53141 149 aa1.53□□□□□ -2.16
SWI5YDR146C IPK1Q06667 281 aa1.53□□□□□ -2.16
SWI5YDR146C YPR078CQ06813 372 aa1.53□□□□□ -2.16
SWI5YDR146C ASA1Q06822 443 aa1.53□□□□□ -2.16
SWI5YDR146C YDL114WQ07530 308 aa1.53□□□□□ -2.16
SWI5YDR146C LOT6Q07923 191 aa1.53□□□□□ -2.16
SWI5YDR146C SMC5Q08204 1093 aa1.53□□□□□ -2.16
SWI5YDR146C CHA1P25379 360 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C MRPL10P36520 322 aa1.52□□□□□ -2.17
SWI5YDR146C RTC2P38279 296 aa1.52□□□□□ -2.17
SWI5YDR146C ALD5P40047 520 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C JEM1P40358 645 aa1.52□□□□□ -2.17
SWI5YDR146C SEC28P40509 296 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C KEG1P43614 200 aa1.52□□□□□ -2.17
SWI5YDR146C AIM24P47127 394 aa1.52□□□□□ -2.17
SWI5YDR146C ASN2P49090 572 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C AAD15Q08361 143 aa1.52□□□□□ -2.17
SWI5YDR146C YOP1Q12402 180 aa1.52□□□□□ -2.17
SWI5YDR146C EAF3Q12432 401 aa1.52□□□□□ -2.17
SWI5YDR146C SKS1Q12505 502 aa1.52□□□□□ -2.17
SWI5YDR146C ARF1P11076 181 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C NAM2P11325 894 aa1.52□□□□□ -2.17
SWI5YDR146C HSP26P15992 214 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
SWI5YDR146C DAP2P18962 818 aa1.52□□□□□ -2.17
SWI5YDR146C AAT2P23542 418 aaKnown RBP1.52□□□□□ -2.17
SWI5YDR146C COX13P32799 129 aa1.52□□□□□ -2.17
SWI5YDR146C YER186CP40101 306 aa1.52□□□□□ -2.17
SWI5YDR146C PGU1P47180 361 aa1.52□□□□□ -2.17
SWI5YDR146C SPR6Q01684 191 aa1.52□□□□□ -2.17
SWI5YDR146C PRM6Q04705 352 aa1.52□□□□□ -2.17
SWI5YDR146C SRN2Q99176 213 aa1.52□□□□□ -2.17
SWI5YDR146C TPK3P05986 398 aa1.51□□□□□ -2.17
SWI5YDR146C PIS1P06197 220 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C PDE2P06776 526 aa1.51□□□□□ -2.17
SWI5YDR146C PCL1P24867 279 aa1.51□□□□□ -2.17
SWI5YDR146C SLM5P25345 492 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C SPT10P35208 640 aa1.51□□□□□ -2.17
SWI5YDR146C RXT2P38255 430 aa1.51□□□□□ -2.17
SWI5YDR146C YSW1P38280 609 aa1.51□□□□□ -2.17
SWI5YDR146C MNL1P38888 796 aa1.51□□□□□ -2.17
SWI5YDR146C GDI1P39958 451 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C ATM1P40416 690 aa1.51□□□□□ -2.17
SWI5YDR146C BIR1P47134 954 aa1.51□□□□□ -2.17
SWI5YDR146C RRP46P53256 223 aaPredicted RBP1.51□□□□□ -2.17
SWI5YDR146C CRH1P53301 507 aa1.51□□□□□ -2.17
SWI5YDR146C SKI8Q02793 397 aaPredicted RBP1.51□□□□□ -2.17
SWI5YDR146C YPR091CQ06833 770 aa1.51□□□□□ -2.17
SWI5YDR146C YFH1Q07540 174 aa1.51□□□□□ -2.17
SWI5YDR146C MCT1Q12283 360 aa1.51□□□□□ -2.17
SWI5YDR146C SFG1Q12507 346 aa1.51□□□□□ -2.17
SWI5YDR146C NAT1P12945 854 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C PRR1P28708 518 aa1.51□□□□□ -2.17
SWI5YDR146C SPO23P33757 523 aa1.51□□□□□ -2.17
SWI5YDR146C TIR2P33890 251 aa1.51□□□□□ -2.17
SWI5YDR146C ADH5P38113 351 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C SPP381P38282 291 aaPredicted RBP1.51□□□□□ -2.17
SWI5YDR146C OM14P38325 134 aa1.51□□□□□ -2.17
SWI5YDR146C OXA1P39952 402 aa1.51□□□□□ -2.17
SWI5YDR146C CLD1P53264 445 aa1.51□□□□□ -2.17
SWI5YDR146C HAL1Q01766 294 aa1.51□□□□□ -2.17
SWI5YDR146C SXM1Q04175 944 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C YET2Q04210 160 aa1.51□□□□□ -2.17
SWI5YDR146C YHC1Q05900 231 aaKnown RBP1.51□□□□□ -2.17
SWI5YDR146C LDS2Q08218 356 aa1.51□□□□□ -2.17
SWI5YDR146C FCY22Q12119 530 aa1.51□□□□□ -2.17
SWI5YDR146C PSO2P30620 661 aa1.5□□□□□ -2.17
SWI5YDR146C DOA1P36037 715 aa1.5□□□□□ -2.17
SWI5YDR146C UTH1P36135 365 aa1.5□□□□□ -2.17
SWI5YDR146C LCP5P40079 357 aaPredicted RBP1.5□□□□□ -2.17
SWI5YDR146C MAM33P40513 266 aa1.5□□□□□ -2.17
SWI5YDR146C YFR057WP43625 151 aa1.5□□□□□ -2.17
SWI5YDR146C YIP5P53108 310 aa1.5□□□□□ -2.17
SWI5YDR146C ADA2Q02336 434 aa1.5□□□□□ -2.17
SWI5YDR146C YDL199CQ12407 687 aa1.5□□□□□ -2.17
SWI5YDR146C CDC50P25656 391 aa1.49□□□□□ -2.17
SWI5YDR146C FAA1P30624 700 aaKnown RBP1.49□□□□□ -2.17
SWI5YDR146C RAD5P32849 1169 aaPredicted RBP1.49□□□□□ -2.17
SWI5YDR146C VAM7P32912 316 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms