RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W UTP6Q02354 440 aaKnown RBP4.32□□□□□ -1.72
PTC1YDL006W IRC15Q02733 499 aa4.32□□□□□ -1.72
PTC1YDL006W KAP120Q02932 1032 aa4.32□□□□□ -1.72
PTC1YDL006W RRP45Q05636 305 aaKnown RBP4.32□□□□□ -1.72
PTC1YDL006W DDC1Q08949 612 aa4.32□□□□□ -1.72
PTC1YDL006W RIO1Q12196 484 aaKnown RBP4.32□□□□□ -1.72
PTC1YDL006W HRT3Q12347 344 aa4.32□□□□□ -1.72
PTC1YDL006W ATP10P18496 279 aa4.31□□□□□ -1.72
PTC1YDL006W YIM1P28625 365 aa4.31□□□□□ -1.72
PTC1YDL006W GCG1P32656 232 aaKnown RBP4.31□□□□□ -1.72
PTC1YDL006W PCA1P38360 1216 aa4.31□□□□□ -1.72
PTC1YDL006W END3P39013 349 aa4.31□□□□□ -1.72
PTC1YDL006W ELP2P42935 788 aa4.31□□□□□ -1.72
PTC1YDL006W PNG1Q02890 363 aa4.31□□□□□ -1.72
PTC1YDL006W ELP3Q02908 557 aaKnown RBP4.31□□□□□ -1.72
PTC1YDL006W ARX1Q03862 593 aaKnown RBP4.31□□□□□ -1.72
PTC1YDL006W KAP95Q06142 861 aaKnown RBP4.31□□□□□ -1.72
PTC1YDL006W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PTC1YDL006W DIS3Q08162 1001 aaKnown RBP4.31□□□□□ -1.72
PTC1YDL006W NRT1Q08485 598 aa4.31□□□□□ -1.72
PTC1YDL006W DAP1Q12091 152 aa4.31□□□□□ -1.72
PTC1YDL006W AHC1Q12433 566 aa4.31□□□□□ -1.72
PTC1YDL006W LAA1P39526 2014 aa4.3□□□□□ -1.72
PTC1YDL006W LEU4P06208 619 aaKnown RBP4.3□□□□□ -1.72
PTC1YDL006W MRS3P10566 314 aa4.3□□□□□ -1.72
PTC1YDL006W MTF1P14908 341 aaKnown RBP4.3□□□□□ -1.72
PTC1YDL006W SLY1P22213 666 aa4.3□□□□□ -1.72
PTC1YDL006W PPH22P23595 377 aa4.3□□□□□ -1.72
PTC1YDL006W BUB3P26449 341 aa4.3□□□□□ -1.72
PTC1YDL006W MEI4P29467 408 aa4.3□□□□□ -1.72
PTC1YDL006W NDC1P32500 655 aa4.3□□□□□ -1.72
PTC1YDL006W YME2P32843 850 aa4.3□□□□□ -1.72
PTC1YDL006W GCS1P35197 352 aa4.3□□□□□ -1.72
PTC1YDL006W RPC37P36121 282 aa4.3□□□□□ -1.72
PTC1YDL006W YBR056WP38081 501 aa4.3□□□□□ -1.72
PTC1YDL006W ARA1P38115 344 aa4.3□□□□□ -1.72
PTC1YDL006W RFS1P38234 210 aaKnown RBP4.3□□□□□ -1.72
PTC1YDL006W NTC20P38302 140 aaPredicted RBP4.3□□□□□ -1.72
PTC1YDL006W POP4P38336 279 aa4.3□□□□□ -1.72
PTC1YDL006W AVT2P39981 480 aa4.3□□□□□ -1.72
PTC1YDL006W YMR134WP40207 237 aa4.3□□□□□ -1.72
PTC1YDL006W PEX31P53203 462 aa4.3□□□□□ -1.72
PTC1YDL006W ERP1Q05359 219 aaKnown RBP4.3□□□□□ -1.72
PTC1YDL006W YDR278CQ05612 105 aa4.3□□□□□ -1.72
PTC1YDL006W NOP6Q07623 225 aaKnown RBP4.3□□□□□ -1.72
PTC1YDL006W RRD2Q12461 358 aa4.3□□□□□ -1.72
PTC1YDL006W ISN1Q99312 450 aa4.3□□□□□ -1.72
PTC1YDL006W PAB1P04147 577 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
PTC1YDL006W RIP1P08067 215 aa4.29□□□□□ -1.72
PTC1YDL006W FUN19P28003 413 aaPredicted RBP4.29□□□□□ -1.72
PTC1YDL006W PTR2P32901 601 aa4.29□□□□□ -1.72
PTC1YDL006W LTV1P34078 463 aa4.29□□□□□ -1.72
PTC1YDL006W STB6P36085 766 aa4.29□□□□□ -1.72
PTC1YDL006W LAS1P36146 502 aaPredicted RBP4.29□□□□□ -1.72
PTC1YDL006W SPP381P38282 291 aaPredicted RBP4.29□□□□□ -1.72
PTC1YDL006W VHC1P38329 1120 aa4.29□□□□□ -1.72
PTC1YDL006W MSG5P38590 489 aa4.29□□□□□ -1.72
PTC1YDL006W MMS21P38632 267 aa4.29□□□□□ -1.72
PTC1YDL006W YAT2P40017 923 aa4.29□□□□□ -1.72
PTC1YDL006W INA22P40576 216 aa4.29□□□□□ -1.72
PTC1YDL006W RTT101P47050 842 aa4.29□□□□□ -1.72
PTC1YDL006W RPL22BP56628 122 aaKnown RBP4.29□□□□□ -1.72
PTC1YDL006W SKO1Q02100 647 aa4.29□□□□□ -1.72
PTC1YDL006W RLI1Q03195 608 aaKnown RBP4.29□□□□□ -1.72
PTC1YDL006W SPG3Q04398 127 aaPredicted RBP4.29□□□□□ -1.72
PTC1YDL006W YDR018CQ12185 396 aa4.29□□□□□ -1.72
PTC1YDL006W HSP42Q12329 375 aa4.29□□□□□ -1.72
PTC1YDL006W ERP4Q12450 207 aa4.29□□□□□ -1.72
PTC1YDL006W SEY1Q99287 776 aa4.29□□□□□ -1.72
PTC1YDL006W ATR1P13090 542 aa4.28□□□□□ -1.72
PTC1YDL006W THI2P38141 450 aa4.28□□□□□ -1.72
PTC1YDL006W PRM9P39551 298 aa4.28□□□□□ -1.72
PTC1YDL006W MIC19P43594 170 aa4.28□□□□□ -1.72
PTC1YDL006W OGG1P53397 376 aaPredicted RBP4.28□□□□□ -1.72
PTC1YDL006W CRZ1P53968 678 aa4.28□□□□□ -1.72
PTC1YDL006W KTR6P54070 446 aa4.28□□□□□ -1.72
PTC1YDL006W ERB1Q04660 807 aaKnown RBP4.28□□□□□ -1.72
PTC1YDL006W ROY1Q04847 553 aa4.28□□□□□ -1.72
PTC1YDL006W COS7Q07788 383 aa4.28□□□□□ -1.72
PTC1YDL006W NDD1Q08887 554 aa4.28□□□□□ -1.72
PTC1YDL006W RKM5Q12367 367 aa4.28□□□□□ -1.72
PTC1YDL006W IZH4Q99393 312 aa4.28□□□□□ -1.72
PTC1YDL006W QCR6P00127 147 aa4.27□□□□□ -1.73
PTC1YDL006W RPL15AP05748 204 aaKnown RBP4.27□□□□□ -1.73
PTC1YDL006W RAD1P06777 1100 aa4.27□□□□□ -1.73
PTC1YDL006W YML002WP0CF17 737 aa4.27□□□□□ -1.73
PTC1YDL006W CLB1P24868 471 aa4.27□□□□□ -1.73
PTC1YDL006W URA7P28274 579 aaKnown RBP4.27□□□□□ -1.73
PTC1YDL006W PRP21P32524 280 aaPredicted RBP4.27□□□□□ -1.73
PTC1YDL006W SIF2P38262 535 aa4.27□□□□□ -1.73
PTC1YDL006W SRP72P38688 640 aaKnown RBP4.27□□□□□ -1.73
PTC1YDL006W MDM31P38880 579 aa4.27□□□□□ -1.73
PTC1YDL006W FHL1P39521 936 aa4.27□□□□□ -1.73
PTC1YDL006W BTT1P40314 149 aaPredicted RBP4.27□□□□□ -1.73
PTC1YDL006W MKT1P40850 830 aaKnown RBP4.27□□□□□ -1.73
PTC1YDL006W YNL320WP42840 284 aa4.27□□□□□ -1.73
PTC1YDL006W YJL132WP47014 750 aa4.27□□□□□ -1.73
PTC1YDL006W GWT1P47026 490 aa4.27□□□□□ -1.73
PTC1YDL006W YJR079WP47126 109 aa4.27□□□□□ -1.73
PTC1YDL006W VPS9P54787 451 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms