RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YDR476CQ03362 224 aa1.31□□□□□ -2.2
MSH3YCR092C RIM13Q03792 727 aa1.31□□□□□ -2.2
MSH3YCR092C VTI1Q04338 217 aa1.31□□□□□ -2.2
MSH3YCR092C NDE2Q07500 545 aa1.31□□□□□ -2.2
MSH3YCR092C CRT10Q08226 957 aa1.31□□□□□ -2.2
MSH3YCR092C NUR1Q12066 484 aa1.31□□□□□ -2.2
MSH3YCR092C RPL6BP05739 176 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C RPS21AP0C0V8 87 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C SRV2P17555 526 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C HXT2P23585 541 aa1.31□□□□□ -2.2
MSH3YCR092C MGT1P26188 188 aa1.31□□□□□ -2.2
MSH3YCR092C THI4P32318 326 aa1.31□□□□□ -2.2
MSH3YCR092C YEF1P32622 495 aa1.31□□□□□ -2.2
MSH3YCR092C APT2P36973 181 aa1.31□□□□□ -2.2
MSH3YCR092C TDP1P38319 544 aa1.31□□□□□ -2.2
MSH3YCR092C SIC1P38634 284 aa1.31□□□□□ -2.2
MSH3YCR092C YEN1P40028 759 aa1.31□□□□□ -2.2
MSH3YCR092C TPA1P40032 644 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C SCS2P40075 244 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C LCP5P40079 357 aaPredicted RBP1.31□□□□□ -2.2
MSH3YCR092C APQ12P40532 138 aa1.31□□□□□ -2.2
MSH3YCR092C CFD1P40558 293 aa1.31□□□□□ -2.2
MSH3YCR092C BNA6P43619 295 aa1.31□□□□□ -2.2
MSH3YCR092C JHD2P47156 728 aaPredicted RBP1.31□□□□□ -2.2
MSH3YCR092C MSE1P48525 536 aa1.31□□□□□ -2.2
MSH3YCR092C HSV2P50079 448 aaPredicted RBP1.31□□□□□ -2.2
MSH3YCR092C YPL039WQ03080 316 aa1.31□□□□□ -2.2
MSH3YCR092C ADH6Q04894 360 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C SML1Q04964 104 aa1.31□□□□□ -2.2
MSH3YCR092C YOR114WQ12219 294 aa1.31□□□□□ -2.2
MSH3YCR092C LAS17Q12446 633 aa1.31□□□□□ -2.2
MSH3YCR092C QCR7P00128 127 aa1.31□□□□□ -2.2
MSH3YCR092C REP2P03872 296 aa1.31□□□□□ -2.2
MSH3YCR092C HEM13P11353 328 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C VPS33P20795 691 aa1.31□□□□□ -2.2
MSH3YCR092C OCA4P25366 362 aa1.31□□□□□ -2.2
MSH3YCR092C YCL042WP25572 119 aa1.31□□□□□ -2.2
MSH3YCR092C SSE2P32590 693 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C PET127P32606 800 aa1.31□□□□□ -2.2
MSH3YCR092C MTR2P34232 184 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C TEF4P36008 412 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C EXO84P38261 753 aa1.31□□□□□ -2.2
MSH3YCR092C BMT2P38278 337 aa1.31□□□□□ -2.2
MSH3YCR092C RRP4P38792 359 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C SET5P38890 526 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C YHR219WP38900 624 aa1.31□□□□□ -2.2
MSH3YCR092C MNN9P39107 395 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C PAN6P40459 309 aa1.31□□□□□ -2.2
MSH3YCR092C SHR5P41912 237 aa1.31□□□□□ -2.2
MSH3YCR092C MUP1P50276 574 aa1.31□□□□□ -2.2
MSH3YCR092C ERG25P53045 309 aa1.31□□□□□ -2.2
MSH3YCR092C IBD2P53892 351 aa1.31□□□□□ -2.2
MSH3YCR092C REX2P54964 269 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C RRN5Q02983 363 aa1.31□□□□□ -2.2
MSH3YCR092C KRE28Q04431 385 aa1.31□□□□□ -2.2
MSH3YCR092C VBA4Q04602 768 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C YDR124WQ04608 324 aa1.31□□□□□ -2.2
MSH3YCR092C COQ11Q05892 277 aa1.31□□□□□ -2.2
MSH3YCR092C VPS74Q06385 345 aa1.31□□□□□ -2.2
MSH3YCR092C TAZ1Q06510 381 aa1.31□□□□□ -2.2
MSH3YCR092C COQ10Q08058 207 aa1.31□□□□□ -2.2
MSH3YCR092C TMA46Q12000 345 aaKnown RBP1.31□□□□□ -2.2
MSH3YCR092C SWM1Q12379 170 aa1.31□□□□□ -2.2
MSH3YCR092C RMP1Q12530 201 aa1.31□□□□□ -2.2
MSH3YCR092C Q0297Q9ZZV8 51 aa1.31□□□□□ -2.2
MSH3YCR092C CBP2P03874 630 aaPredicted RBP1.3□□□□□ -2.2
MSH3YCR092C RAD10P06838 210 aa1.3□□□□□ -2.2
MSH3YCR092C PHO4P07270 312 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C ERG11P10614 530 aa1.3□□□□□ -2.2
MSH3YCR092C HMG1P12683 1054 aa1.3□□□□□ -2.2
MSH3YCR092C STE12P13574 688 aa1.3□□□□□ -2.2
MSH3YCR092C DPM1P14020 267 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C PDX1P16451 410 aa1.3□□□□□ -2.2
MSH3YCR092C TYR1P20049 452 aa1.3□□□□□ -2.2
MSH3YCR092C RVS161P25343 265 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C CSM1P25651 190 aa1.3□□□□□ -2.2
MSH3YCR092C UTR5P32630 166 aa1.3□□□□□ -2.2
MSH3YCR092C NPL6P32832 435 aa1.3□□□□□ -2.2
MSH3YCR092C YKL107WP34251 309 aa1.3□□□□□ -2.2
MSH3YCR092C ARN1P38731 627 aa1.3□□□□□ -2.2
MSH3YCR092C SAW1P39735 261 aa1.3□□□□□ -2.2
MSH3YCR092C ATM1P40416 690 aa1.3□□□□□ -2.2
MSH3YCR092C LYS12P40495 371 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C IRR1P40541 1150 aa1.3□□□□□ -2.2
MSH3YCR092C ECO1P43605 281 aa1.3□□□□□ -2.2
MSH3YCR092C NIT3P49954 291 aa1.3□□□□□ -2.2
MSH3YCR092C EXG2P52911 562 aa1.3□□□□□ -2.2
MSH3YCR092C YIP5P53108 310 aa1.3□□□□□ -2.2
MSH3YCR092C LSG1P53145 640 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C MPP6P53725 186 aaPredicted RBP1.3□□□□□ -2.2
MSH3YCR092C MOT3P54785 490 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C CTK1Q03957 528 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C YPR174CQ06616 221 aaPredicted RBP1.3□□□□□ -2.2
MSH3YCR092C PEX15Q08215 383 aa1.3□□□□□ -2.2
MSH3YCR092C YDL211CQ12121 372 aa1.3□□□□□ -2.2
MSH3YCR092C NCE102Q12207 173 aaRIP-Chip data1.3□□□□□ -2.2not detected
MSH3YCR092C SKS1Q12505 502 aa1.3□□□□□ -2.2
MSH3YCR092C YLR111WQ12528 110 aa1.3□□□□□ -2.2
MSH3YCR092C PEP4P07267 405 aaKnown RBP1.3□□□□□ -2.2
MSH3YCR092C ELO2P25358 347 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms