RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 PTH1P38876 190 aaKnown RBP7.32□□□□□ -1.24
NME1NME1 PRM1P53835 661 aa7.32□□□□□ -1.24
NME1NME1 IMP4P53941 290 aaKnown RBP7.32□□□□□ -1.24
NME1NME1 MDM36Q06820 579 aa7.32□□□□□ -1.24
NME1NME1 ERV2Q12284 196 aa7.32□□□□□ -1.24
NME1NME1 MCR1P36060 302 aaKnown RBP7.31□□□□□ -1.24
NME1NME1 SNL1P40548 159 aa7.31□□□□□ -1.24
NME1NME1 EFM3P47163 339 aa7.31□□□□□ -1.24
NME1NME1 BOR1P53838 576 aa7.31□□□□□ -1.24
NME1NME1 ALF1P53904 254 aa7.31□□□□□ -1.24
NME1NME1 ELP3Q02908 557 aaKnown RBP7.31□□□□□ -1.24
NME1NME1 CYC3P06182 269 aa7.3□□□□□ -1.24
NME1NME1 STE3P06783 470 aa7.3□□□□□ -1.24
NME1NME1 PHA2P32452 334 aa7.3□□□□□ -1.24
NME1NME1 SBE22P38814 852 aa7.3□□□□□ -1.24
NME1NME1 MTM1P53320 366 aa7.3□□□□□ -1.24
NME1NME1 CWC25P53854 179 aaKnown RBP7.3□□□□□ -1.24
NME1NME1 NUP116Q02630 1113 aa7.3□□□□□ -1.24
NME1NME1 SSC1P0CS90 654 aaKnown RBP7.29□□□□□ -1.24
NME1NME1 YBR139WP38109 508 aa7.29□□□□□ -1.24
NME1NME1 RRN9P53437 365 aa7.29□□□□□ -1.24
NME1NME1 ADA2Q02336 434 aa7.29□□□□□ -1.24
NME1NME1 RRB1Q04225 511 aaKnown RBP7.29□□□□□ -1.24
NME1NME1 YTH1Q06102 208 aaPredicted RBP7.29□□□□□ -1.24
NME1NME1 YOR387CQ08910 206 aa7.29□□□□□ -1.24
NME1NME1 THR4P16120 514 aaKnown RBP7.28□□□□□ -1.24
NME1NME1 MSK1P32048 576 aa7.28□□□□□ -1.24
NME1NME1 MNS1P32906 549 aa7.28□□□□□ -1.24
NME1NME1 MRM2P53123 320 aa7.28□□□□□ -1.24
NME1NME1 TRM112P53738 135 aaPredicted RBP7.28□□□□□ -1.24
NME1NME1 ARO2P28777 376 aaKnown RBP7.27□□□□□ -1.25
NME1NME1 KAR9P32526 644 aa7.27□□□□□ -1.25
NME1NME1 TOA2P32774 122 aa7.27□□□□□ -1.25
NME1NME1 MDE1P47095 244 aa7.27□□□□□ -1.25
NME1NME1 SHE4P51534 789 aa7.27□□□□□ -1.25
NME1NME1 MTQ1P53944 314 aa7.27□□□□□ -1.25
NME1NME1 YMR310CQ04867 317 aaPredicted RBP7.27□□□□□ -1.25
NME1NME1 POP5P28005 173 aa7.26□□□□□ -1.25
NME1NME1 PTK1P36002 662 aaPredicted RBP7.26□□□□□ -1.25
NME1NME1 GEP4P38812 185 aa7.26□□□□□ -1.25
NME1NME1 RET3P53600 189 aa7.26□□□□□ -1.25
NME1NME1 LOT6Q07923 191 aa7.26□□□□□ -1.25
NME1NME1 MAS1P10507 462 aa7.25□□□□□ -1.25
NME1NME1 CBS2P14905 389 aa7.25□□□□□ -1.25
NME1NME1 DAL2P25335 343 aa7.25□□□□□ -1.25
NME1NME1 LYS12P40495 371 aaKnown RBP7.25□□□□□ -1.25
NME1NME1 HST1P53685 503 aa7.25□□□□□ -1.25
NME1NME1 PRM6Q04705 352 aa7.25□□□□□ -1.25
NME1NME1 SPH1Q06160 661 aa7.25□□□□□ -1.25
NME1NME1 YPR078CQ06813 372 aa7.25□□□□□ -1.25
NME1NME1 REX3Q12090 404 aa7.25□□□□□ -1.25
NME1NME1 EAF3Q12432 401 aa7.25□□□□□ -1.25
NME1NME1 AHC1Q12433 566 aa7.25□□□□□ -1.25
NME1NME1 NAM2P11325 894 aa7.24□□□□□ -1.25
NME1NME1 SAG1P20840 650 aa7.24□□□□□ -1.25
NME1NME1 MRPL8P22353 238 aa7.24□□□□□ -1.25
NME1NME1 HMX1P32339 317 aa7.24□□□□□ -1.25
NME1NME1 EFB1P32471 206 aaKnown RBP7.24□□□□□ -1.25
NME1NME1 GPX2P38143 162 aa7.24□□□□□ -1.25
NME1NME1 COS1P53822 381 aa7.24□□□□□ -1.25
NME1NME1 PIS1P06197 220 aaKnown RBP7.23□□□□□ -1.25
NME1NME1 CLN3P13365 580 aa7.23□□□□□ -1.25
NME1NME1 DBR1P24309 405 aaKnown RBP7.23□□□□□ -1.25
NME1NME1 NAM9P27929 486 aa7.23□□□□□ -1.25
NME1NME1 DPH5P32469 300 aaPredicted RBP7.23□□□□□ -1.25
NME1NME1 RFS1P38234 210 aaKnown RBP7.23□□□□□ -1.25
NME1NME1 MAM33P40513 266 aa7.23□□□□□ -1.25
NME1NME1 REE1P40893 198 aa7.23□□□□□ -1.25
NME1NME1 LCB3P47013 409 aa7.23□□□□□ -1.25
NME1NME1 YMR102CQ03177 834 aa7.23□□□□□ -1.25
NME1NME1 MGR3Q04472 501 aa7.23□□□□□ -1.25
NME1NME1 HRI1Q05905 244 aaKnown RBP7.23□□□□□ -1.25
NME1NME1 SMC5Q08204 1093 aa7.23□□□□□ -1.25
NME1NME1 GLE1Q12315 538 aa7.23□□□□□ -1.25
NME1NME1 YOR012WQ12351 137 aa7.23□□□□□ -1.25
NME1NME1 FSH3Q99369 266 aa7.23□□□□□ -1.25
NME1NME1 RPS8AP0CX39 200 aaKnown RBP7.22□□□□□ -1.25
NME1NME1 RPS8BP0CX40 200 aaKnown RBP7.22□□□□□ -1.25
NME1NME1 PET123P17558 318 aa7.22□□□□□ -1.25
NME1NME1 RAD5P32849 1169 aaPredicted RBP7.22□□□□□ -1.25
NME1NME1 TIR2P33890 251 aa7.22□□□□□ -1.25
NME1NME1 CCT4P39078 528 aaKnown RBP7.22□□□□□ -1.25
NME1NME1 HTZ1Q12692 134 aaKnown RBP7.22□□□□□ -1.25
NME1NME1 YCR024C-BQ3E7Z8 88 aa7.22□□□□□ -1.25
NME1NME1 SEC9P40357 651 aa7.21□□□□□ -1.26
NME1NME1 YGK3Q12222 375 aaPredicted RBP7.21□□□□□ -1.26
NME1NME1 SUP35P05453 685 aaKnown RBP7.2□□□□□ -1.26
NME1NME1 MAS2P11914 482 aa7.2□□□□□ -1.26
NME1NME1 SRB2P34162 210 aa7.2□□□□□ -1.26
NME1NME1 PAN6P40459 309 aa7.2□□□□□ -1.26
NME1NME1 SPG5P42933 373 aa7.2□□□□□ -1.26
NME1NME1 YPI1P43587 155 aa7.2□□□□□ -1.26
NME1NME1 AIM24P47127 394 aa7.2□□□□□ -1.26
NME1NME1 AIM33Q04516 312 aa7.2□□□□□ -1.26
NME1NME1 YHR131CP38835 850 aa7.19□□□□□ -1.26
NME1NME1 LCP5P40079 357 aaPredicted RBP7.19□□□□□ -1.26
NME1NME1 YGR210CP42942 411 aa7.19□□□□□ -1.26
NME1NME1 MRPL35Q06678 367 aa7.19□□□□□ -1.26
NME1NME1 MEX67Q99257 599 aaKnown RBP7.19□□□□□ -1.26
NME1NME1 AVT5P38176 459 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms