RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 IGF2BP3O00425 579 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC02228-204ENST00000642115 NCALDP61601 193 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 FIGNQ5HY92 759 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 MMTAG2Q9BU76 263 aaKnown RBP17.12■□□□□ 0.33
LINC02228-204ENST00000642115 BARHL2Q9NY43 387 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
LINC02228-204ENST00000642115 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
LINC02228-204ENST00000642115 CHN1P15882 459 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 FERP16591 822 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
LINC02228-204ENST00000642115 KCNQ4P56696 695 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 TNNC1P63316 161 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
LINC02228-204ENST00000642115 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 NUDT12Q9BQG2 462 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 TRIM31Q9BZY9 425 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
LINC02228-204ENST00000642115 SART1O43290 800 aaKnown RBP17.11■□□□□ 0.33
LINC02228-204ENST00000642115 MMEP08473 750 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 RARAP10276 462 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 EPS15P42566 896 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 ITIH4Q14624 930 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 TAF11Q15544 211 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 FAM83BQ5T0W9 1011 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 NEK8Q86SG6 692 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
LINC02228-204ENST00000642115 A0A087X0T9 212 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 KRT16P08779 473 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 FGRP09769 529 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 FAM228BP0C875 321 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ASAP2O43150 1006 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 TLR2O60603 784 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 TUBP50607 506 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 KCNMA1Q12791 1236 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 DIXDC1Q155Q3 683 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 RNF10Q8N5U6 811 aaKnown RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 DDX12PQ92771 950 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 TSG101Q99816 390 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 AFF2P51816 1311 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 NTSR2O95665 410 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 KLHL30Q0D2K2 578 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 GRB10Q13322 594 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 CUL1Q13616 776 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 MAPKAPK5Q8IW41 473 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 TMEM47Q9BQJ4 181 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
LINC02228-204ENST00000642115 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
LINC02228-204ENST00000642115 A0A1B0GVG6 124 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 M0R2N6 131 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 SHBGP04278 402 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 LAMB3Q13751 1172 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 ASTE1Q2TB18 679 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 SELENOSQ9BQE4 189 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 DDX47Q9H0S4 455 aaKnown RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 ADAM22Q9P0K1 906 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 RPS6KL1Q9Y6S9 549 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 TDP2O95551 362 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 GNAQP50148 359 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 CALCRLQ16602 461 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 EZH1Q92800 747 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 TLCD1Q96CP7 247 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 AK8Q96MA6 479 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 PIGSQ96S52 555 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 C6orf50Q9HD87 102 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 SAMD15Q9P1V8 674 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 TMEM59LQ9UK28 342 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 ZNF804BA4D1E1 1349 aa17.09■□□□□ 0.33
LINC02228-204ENST00000642115 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-204ENST00000642115 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.33
LINC02228-204ENST00000642115 DAPK3O43293 454 aa17.08■□□□□ 0.33
LINC02228-204ENST00000642115 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms