RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 MMGT1Q8N4V1 131 aa20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 RNF10Q8N5U6 811 aaKnown RBP20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 PIGOQ8TEQ8 1089 aa20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 NOX5Q96PH1 765 aa20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 TMOD2Q9NZR1 351 aa20.79■□□□□ 0.92
CROCCP2-206ENST00000639594 SFI1A8K8P3 1242 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 TCP1P17987 556 aaKnown RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 RINT1Q6NUQ1 792 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 OTOP1Q7RTM1 612 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 SGIP1Q9BQI5 828 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 TLR10Q9BXR5 811 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 ZNF277Q9NRM2 450 aaPredicted RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 SMARCAL1Q9NZC9 954 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 EHD2Q9NZN4 543 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 ASTN1O14525 1302 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 A0A087X0T9 212 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 GCNT3O95395 438 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 FAM228BP0C875 321 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 MYBL2P10244 700 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 NAP1L1P55209 391 aaKnown RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 UBXN2AP68543 259 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 KCNA1Q09470 495 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 KLHL30Q0D2K2 578 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 ASIC2Q16515 512 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 SLC18A3Q16572 532 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 BMT2Q1RMZ1 405 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 GSPT2Q8IYD1 628 aaKnown RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 HSD17B14Q9BPX1 270 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 TYW1Q9NV66 732 aaKnown RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 VPS18Q9P253 973 aa20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
CROCCP2-206ENST00000639594 TBCAO75347 108 aaKnown RBP20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 AKAP3O75969 853 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 AFPP02771 609 aaKnown RBP20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 CASP4P49662 377 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 MAP9Q49MG5 647 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 CCNI2Q6ZMN8 369 aaPredicted RBP20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 SPATA4Q8NEY3 305 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 DYDC2Q96IM9 177 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 HINFPQ9BQA5 517 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 ZBTB21Q9ULJ3 1066 aa20.77■□□□□ 0.92
CROCCP2-206ENST00000639594 ZBTB39O15060 712 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 CLIC2O15247 247 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 CHMP2AO43633 222 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 PSMD10O75832 226 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 SLITRK3O94933 977 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 NR3C1P04150 777 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 KLRC1P26715 233 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 TNNT3P45378 269 aaPredicted RBP20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 TGFB2P61812 414 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 ITIH3Q06033 890 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 LRCH2Q5VUJ6 765 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 RSBN1LQ6PCB5 846 aaPredicted RBP20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 TPH2Q8IWU9 490 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 RTKN2Q8IZC4 609 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 CCDC102AQ96A19 550 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 ZFP91Q96JP5 570 aaPredicted RBP20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 PIM2Q9P1W9 311 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 ADAMTS1Q9UHI8 967 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 CNTNAP1P78357 1384 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 RAD17O75943 681 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 NAB2Q15742 525 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 LRRC1Q9BTT6 524 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 RANBP17Q9H2T7 1088 aaKnown RBP20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 TUFT1Q9NNX1 390 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 PLCB1Q9NQ66 1216 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 FAN1Q9Y2M0 1017 aa20.76■□□□□ 0.91
CROCCP2-206ENST00000639594 XRCC5P13010 732 aaKnown RBP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 PON1P27169 355 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 ZYXQ15942 572 aaKnown RBP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 DCAF17Q5H9S7 520 aaPredicted RBP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 HDAC7Q8WUI4 952 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 SLC5A5Q92911 643 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 GDAP1L1Q96MZ0 367 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 PSMD1Q99460 953 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 PACSIN1Q9BY11 444 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 IKZF4Q9H2S9 585 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 VIPAS39Q9H9C1 493 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 SRCAPQ6ZRS2 3230 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 PALMO75781 387 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 UCHL3P15374 230 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 MATR3P43243 847 aaKnown RBP eCLIP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 TRAF1Q13077 416 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 DLGAP5Q15398 846 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 CCDC181Q5TID7 509 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 C1orf186Q6ZWK4 172 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 CDAN1Q8IWY9 1227 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 LUC7LQ9NQ29 371 aaKnown RBP20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 OLFML3Q9NRN5 406 aa20.75■□□□□ 0.91
CROCCP2-206ENST00000639594 TGFB1I1O43294 461 aa20.74■□□□□ 0.91
CROCCP2-206ENST00000639594 GAP43P17677 238 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms