RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CCT6AP40227 531 aaKnown RBP17.93■□□□□ 0.46
CLN6-216ENST00000636876 ME1P48163 572 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 KRT79Q5XKE5 535 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 NFRKBQ6P4R8 1299 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 POTEBQ6S5H4 581 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 SLC39A5Q6ZMH5 540 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 TPH2Q8IWU9 490 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 PPP1R13LQ8WUF5 828 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 FAM167AQ96KS9 214 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 MMTAG2Q9BU76 263 aaKnown RBP17.93■□□□□ 0.46
CLN6-216ENST00000636876 SEZ6LQ9BYH1 1024 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 WRAP73Q9P2S5 460 aaPredicted RBP17.93■□□□□ 0.46
CLN6-216ENST00000636876 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
CLN6-216ENST00000636876 HBP1O60381 514 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 STBD1O95210 358 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 LYPLA2O95372 231 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 OATP04181 439 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 SMIM10L2AP0DMW4 78 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 SMIM10L2BP0DMW5 78 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 MUTP22033 750 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 CDK7P50613 346 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 ATN1P54259 1190 aaPredicted RBP17.92■□□□□ 0.46
CLN6-216ENST00000636876 SNX17Q15036 470 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 XKR3Q5GH77 459 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 AXDND1Q5T1B0 1012 aaPredicted RBP17.92■□□□□ 0.46
CLN6-216ENST00000636876 SESTD1Q86VW0 696 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 CATSPER3Q86XQ3 398 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 C4orf19Q8IY42 314 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 HDAC6Q9UBN7 1215 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 PCDHA7Q9UN72 937 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 TRPC6Q9Y210 931 aa17.92■□□□□ 0.46
CLN6-216ENST00000636876 SLC26A4O43511 780 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 UBA7P41226 1012 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 PTPN11Q06124 597 aaPredicted RBP17.91■□□□□ 0.46
CLN6-216ENST00000636876 PPFIA1Q13136 1202 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 FAM47CQ5HY64 1035 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 C1orf53Q5VUE5 145 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 CABP7Q86V35 215 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 ZNF579Q8NAF0 562 aaKnown RBP17.91■□□□□ 0.46
CLN6-216ENST00000636876 BBXQ8WY36 941 aaPredicted RBP17.91■□□□□ 0.46
CLN6-216ENST00000636876 GDPD2Q9HCC8 539 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 NRBP2Q9NSY0 501 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 GTF2IRD1Q9UHL9 959 aa17.91■□□□□ 0.46
CLN6-216ENST00000636876 KAT6AQ92794 2004 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 DDX11L8A8MPP1 907 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 INSRRP14616 1297 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 HOXC8P31273 242 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 GRIK4Q16099 956 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 ECM1Q16610 540 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 HYIQ5T013 277 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 POTEGQ6S5H5 508 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 USP49Q70CQ1 688 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
CLN6-216ENST00000636876 SYMPKQ92797 1274 aaKnown RBP17.9■□□□□ 0.46
CLN6-216ENST00000636876 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 CCSER1Q9C0I3 900 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 SEPT9Q9UHD8 586 aaPredicted RBP17.9■□□□□ 0.46
CLN6-216ENST00000636876 KDM3AQ9Y4C1 1321 aa17.9■□□□□ 0.46
CLN6-216ENST00000636876 C17orf102A2RUQ5 167 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 RRN3P2A6NIE6 340 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 RTP1P59025 263 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 GRB10Q13322 594 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 ZNF484Q5JVG2 852 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 GDF6Q6KF10 455 aaPredicted RBP17.89■□□□□ 0.45
CLN6-216ENST00000636876 ANO5Q75V66 913 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 LMBR1Q8WVP7 490 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 PNMA5Q96PV4 448 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 NIFKQ9BYG3 293 aaKnown RBP17.89■□□□□ 0.45
CLN6-216ENST00000636876 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
CLN6-216ENST00000636876 SETD4Q9NVD3 440 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 KIAA1024Q9UPX6 916 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 MROH7Q68CQ1 1323 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 NRCAMQ92823 1304 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 COL1A2P08123 1366 aa17.89■□□□□ 0.45
CLN6-216ENST00000636876 TMEM150BA6NC51 233 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 ZBTB42B2RXF5 422 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 ZBTB39O15060 712 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 GNAT1P11488 350 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLN6-216ENST00000636876 YWHABP31946 246 aaKnown RBP17.88■□□□□ 0.45
CLN6-216ENST00000636876 TXLNAP40222 546 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 ADAM17P78536 824 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 HIC1Q14526 733 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 TARBP2Q15633 366 aaKnown RBP17.88■□□□□ 0.45
CLN6-216ENST00000636876 ZRSR1Q15695 479 aaKnown RBP17.88■□□□□ 0.45
CLN6-216ENST00000636876 TRIM60Q495X7 471 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 TMEM119Q4V9L6 283 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 PLA2G4FQ68DD2 849 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 SHC4Q6S5L8 630 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 OTUD6AQ7L8S5 288 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 ANKRD33Q7Z3H0 272 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 CALML4Q96GE6 196 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 NACC1Q96RE7 527 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 NT5C3AQ9H0P0 336 aa17.88■□□□□ 0.45
CLN6-216ENST00000636876 ANKEF1Q9NU02 776 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms