RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PI4K2BQ8TCG2 481 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 FGD4Q96M96 766 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 DHX16O60231 1041 aaKnown RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 CSPG5O95196 566 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 BAG4O95429 457 aaKnown RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 HSP90AA1P07900 732 aaKnown RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 HAND2P61296 217 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 NUCB2P80303 420 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 PPARAQ07869 468 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 BAATQ14032 418 aaPredicted RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 USH1GQ495M9 461 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 TTBK2Q6IQ55 1244 aa5.59□□□□□ -1.51
LINC00550-201ENST00000629293 KCTD12Q96CX2 325 aaKnown RBP5.59□□□□□ -1.51
LINC00550-201ENST00000629293 COL11A1P12107 1806 aaPredicted RBP5.59□□□□□ -1.52
LINC00550-201ENST00000629293 SPTBN4Q9H254 2564 aa5.59□□□□□ -1.52
LINC00550-201ENST00000629293 TRIOO75962 3097 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 NFIBO00712 420 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 MRE11P49959 708 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 DNM1Q05193 864 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 SBK1Q52WX2 424 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TMEM67Q5HYA8 995 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 MEI1Q5TIA1 1274 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 SPRED2Q7Z698 418 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 FAM133AQ8N9E0 248 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 OR6J1Q8NGC5 347 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 ATXN2LQ8WWM7 1075 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 COPS5Q92905 334 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 WDR11Q9BZH6 1224 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 WNT8AQ9H1J5 351 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 DNAJC25Q9H1X3 360 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 PRR12Q9ULL5 1215 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TRANK1O15050 2925 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 WDR87Q6ZQQ6 2873 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 GRIN2DO15399 1336 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 GNAT2P19087 354 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CST5P28325 142 aaPredicted RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CUL4AQ13619 759 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TCEAL1Q15170 157 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 Q6ZVU0 165 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 NEDD1Q8NHV4 660 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 UIMC1Q96RL1 719 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 ALDH8A1Q9H2A2 487 aaPredicted RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CPVLQ9H3G5 476 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CYP39A1Q9NYL5 469 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TET1Q8NFU7 2136 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 WDFY4Q6ZS81 3184 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 PLXNA1Q9UIW2 1896 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 SERTM1A2A2V5 107 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CTAGE5O15320 804 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 ZFYP08048 801 aaPredicted RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TXLNAP40222 546 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TRIP4Q15650 581 aaPredicted RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 KLHL40Q2TBA0 621 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 LRRFIP1Q32MZ4 808 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 BRDTQ58F21 947 aaPredicted RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 VPS53Q5VIR6 699 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 XKR5Q6UX68 686 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 FAM160B2Q86V87 743 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 CCDC116Q8IYX3 515 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 EPS8L3Q8TE67 593 aaKnown RBP5.58□□□□□ -1.52
LINC00550-201ENST00000629293 STAG1Q8WVM7 1258 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 PANK2Q9BZ23 570 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 IL25Q9H293 177 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 C12orf49Q9H741 205 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 ZDHHC9Q9Y397 364 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 LTBP2Q14767 1821 aa5.58□□□□□ -1.52
LINC00550-201ENST00000629293 TNKSO95271 1327 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ATP2A1O14983 1001 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 CABYRO75952 493 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ATF4P18848 351 aaPredicted RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 GTF2F1P35269 517 aaKnown RBP eCLIP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 MCM2P49736 904 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 PKP1Q13835 747 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 PPP2R5BQ15173 497 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 GAS2L3Q86XJ1 694 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF654Q8IZM8 581 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 RASGRP4Q8TDF6 673 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 HERVK_113Q902F9 699 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 GRPEL1Q9HAV7 217 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 EP300Q09472 2414 aaPredicted RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 TPRP12270 2363 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ZNF536O15090 1300 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 ANKRD62A6NC57 917 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 FAM86C2PA6NEL3 165 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 KIF28PB7ZC32 967 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 CD4P01730 458 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 DNAJA1P31689 397 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 OAZ1P54368 228 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 DHX9Q08211 1270 aaKnown RBP5.57□□□□□ -1.52
LINC00550-201ENST00000629293 CLN3Q13286 438 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 SDE2Q6IQ49 451 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 RCSD1Q6JBY9 416 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 SLC30A10Q6XR72 485 aa5.57□□□□□ -1.52
LINC00550-201ENST00000629293 SEPT14Q6ZU15 432 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms