RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 RDM1Q8NG50 284 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 NOC3LQ8WTT2 800 aaKnown RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 STAMQ92783 540 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 LENG9Q96B70 501 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 MMTAG2Q9BU76 263 aaKnown RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 C11orf49Q9H6J7 331 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 MAGEC2Q9UBF1 373 aaPredicted RBP11.28□□□□□ -0.6
LINC01943-202ENST00000628090 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
LINC01943-202ENST00000628090 LOC102724159A0A0B4J2E5 919 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
LINC01943-202ENST00000628090 CHMP2AO43633 222 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 EDIL3O43854 480 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 COBLO75128 1261 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 PSMD10O75832 226 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 P4HBP07237 508 aaKnown RBP11.27□□□□□ -0.61
LINC01943-202ENST00000628090 PLA2G4BP0C869 781 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 IDEP14735 1019 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 SYN1P17600 705 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 CAPN2P17655 700 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 ERCC3P19447 782 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 CDC25BP30305 580 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 SPAG1Q07617 926 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 MCM6Q14566 821 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 PWP2Q15269 919 aaKnown RBP11.27□□□□□ -0.61
LINC01943-202ENST00000628090 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 SPATA1Q5VX52 437 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 STXBP4Q6ZWJ1 553 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 VSIG10LQ86VR7 867 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 TPH2Q8IWU9 490 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 TSG101Q99816 390 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 EIF2AK1Q9BQI3 630 aaKnown RBP11.27□□□□□ -0.61
LINC01943-202ENST00000628090 TRIM9Q9C026 710 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 AGO4Q9HCK5 861 aaKnown RBP11.27□□□□□ -0.61
LINC01943-202ENST00000628090 KCND2Q9NZV8 630 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 RWDD2AQ9UIY3 292 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 RIPK3Q9Y572 518 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.61
LINC01943-202ENST00000628090 WDR64B1ANS9 1081 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 TBCAO75347 108 aaKnown RBP11.26□□□□□ -0.61
LINC01943-202ENST00000628090 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
LINC01943-202ENST00000628090 EYA4O95677 639 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 HOXC6P09630 235 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 COL6A1P12109 1028 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 FCER1AP12319 257 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
LINC01943-202ENST00000628090 ADORA2AP29274 412 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 PRAMEF19Q5SWL8 479 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 GPBP1Q86WP2 473 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 CATSPER3Q86XQ3 398 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 SMAP1Q8IYB5 467 aaPredicted RBP11.26□□□□□ -0.61
LINC01943-202ENST00000628090 MRFAP1L1Q96HT8 127 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 PDLIM2Q96JY6 352 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 MMP19Q99542 508 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 A1CFQ9NQ94 594 aaKnown RBP11.26□□□□□ -0.61
LINC01943-202ENST00000628090 BLOC1S4Q9NUP1 217 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 VAV3Q9UKW4 847 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 CTNND2Q9UQB3 1225 aa11.26□□□□□ -0.61
LINC01943-202ENST00000628090 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 DDX39AO00148 427 aaKnown RBP11.25□□□□□ -0.61
LINC01943-202ENST00000628090 MED24O75448 989 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 PSAPP07602 524 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 ARP10275 920 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 GAP43P17677 238 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 ITGB5P18084 799 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 CNGA1P29973 690 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 ZNF75DP51815 510 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 COBLL1Q53SF7 1204 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 MFSD14CQ5VZR4 134 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 ZNF746Q6NUN9 644 aaPredicted RBP11.25□□□□□ -0.61
LINC01943-202ENST00000628090 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC01943-202ENST00000628090 OTUD6AQ7L8S5 288 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 SYT2Q8N9I0 419 aaPredicted RBP11.25□□□□□ -0.61
LINC01943-202ENST00000628090 CYP2W1Q8TAV3 490 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 DDX12PQ92771 950 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
LINC01943-202ENST00000628090 GDF15Q99988 308 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms