RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 GPSM2P81274 684 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 GIT2Q14161 759 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 UBE2SQ16763 222 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 CCDC40Q4G0X9 1142 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 TMC3Q7Z5M5 1100 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 METTL13Q8N6R0 699 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 LENG9Q96B70 501 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 NAP1L4Q99733 375 aaKnown RBP14.32□□□□□ -0.12
SKP2-209ENST00000620197 ASTN1O14525 1302 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 ZMYM2Q9UBW7 1377 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 LOC102724159A0A0B4J2E5 919 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 CCDC188H7C350 402 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 SLC16A3O15427 465 aaKnown RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 PWP2Q15269 919 aaKnown RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 CCDC65Q8IXS2 484 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 CYFIP2Q96F07 1278 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 FRMPD4Q14CM0 1322 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 PPFIA2O75334 1257 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 SPATA31C1P0DKV0 1188 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 ACTN1P12814 892 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 ERCC3P19447 782 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 SLC9A1P19634 815 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 SMTNP53814 917 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 SEC24CP53992 1094 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 RPS6KA1Q15418 735 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 LACTB2Q53H82 288 aaPredicted RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 MYCBPQ99417 103 aaPredicted RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 GPR88Q9GZN0 384 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 LRRC4CQ9HCJ2 640 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
SKP2-209ENST00000620197 NOC2LQ9Y3T9 749 aaKnown RBP14.31□□□□□ -0.12
SKP2-209ENST00000620197 SART1O43290 800 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 GFPT2O94808 682 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 ADAM9Q13443 819 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 CUL5Q93034 780 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 KANSL2Q9H9L4 492 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 CNOT8Q9UFF9 292 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 PGRMC1O00264 195 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 ZBTB5O15062 677 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 DDX3YO15523 660 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 AKR1B1P15121 316 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 PPATQ06203 517 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 TCEAL1Q15170 157 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 DCAF12L1Q5VU92 463 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 ZDHHC18Q9NUE0 388 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 DDX20Q9UHI6 824 aaKnown RBP14.3□□□□□ -0.12
SKP2-209ENST00000620197 MTMR7Q9Y216 660 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 POTEB3A0JP26 581 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 POTECB2RU33 542 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.123e-12■■■■■ 59.2
SKP2-209ENST00000620197 PDXKO00764 312 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 SLC35C1Q96A29 364 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 CENPTQ96BT3 561 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 KIAA1024Q9UPX6 916 aa14.3□□□□□ -0.12
SKP2-209ENST00000620197 KCNQ4P56696 695 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 SPRED3Q2MJR0 410 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 Q4G0T1 1027 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 SYT2Q8N9I0 419 aaPredicted RBP14.29□□□□□ -0.12
SKP2-209ENST00000620197 MXD3Q9BW11 206 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 KCNK3O14649 394 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 AKAP3O75969 853 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 TTLL1O95922 423 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 AFPP02771 609 aaKnown RBP14.29□□□□□ -0.12
SKP2-209ENST00000620197 SHMT1P34896 483 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 MMP14P50281 582 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
SKP2-209ENST00000620197 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 CEP85LQ5SZL2 805 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 OSBPL7Q9BZF2 842 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
SKP2-209ENST00000620197 F8VZ95 297 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 ITGA4P13612 1032 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 QPCTQ16769 361 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 LNX1Q8TBB1 728 aaPredicted RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 LRRC45Q96CN5 670 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 CABS1Q96KC9 395 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 GPR101Q96P66 508 aaPredicted RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 POLD4Q9HCU8 107 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 DAGLAQ9Y4D2 1042 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 GMNCA6NCL1 334 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 TBX3O15119 743 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 ZPR1O75312 459 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 NR2F2P24468 414 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 RFC4P35249 363 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 TNNI2P48788 182 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 MCCD1P59942 119 aaPredicted RBP14.28□□□□□ -0.12
SKP2-209ENST00000620197 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
SKP2-209ENST00000620197 IFI16Q16666 785 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms