RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 PTPDC1A2A3K4 754 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 C17orf102A2RUQ5 167 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 NFIBO00712 420 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 LRRN2O75325 713 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 RETP07949 1114 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 BMP3P12645 472 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 IKQ13123 557 aaPredicted RBP12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 LPAL2Q16609 132 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 LY6KQ17RY6 165 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 PDZD3Q86UT5 571 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
AP003900.1-202ENST00000616952 EIF4E1BA6NMX2 242 aaKnown RBP12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 TM4SF5O14894 197 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 TREHO43280 583 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 FOXD2O60548 495 aaPredicted RBP12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 GHRP10912 638 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 SRFP11831 508 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 HOXD8P13378 290 aaPredicted RBP12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 HOXC8P31273 242 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 SNAP25P60880 206 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 PTGDRQ13258 359 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 TNNI3KQ59H18 835 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 FAM160B2Q86V87 743 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 NPAS4Q8IUM7 802 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 GPR20Q99678 358 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 BCO2Q9BYV7 579 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 FPGT-TNNI3KV9GXZ4 949 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 PATJQ8NI35 1801 aa12.14□□□□□ -0.47
AP003900.1-202ENST00000616952 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 KCNK5O95279 499 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 SPINK2P20155 84 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 CALML3P27482 149 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 GATMP50440 423 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 LIMK1P53667 647 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 C12orf76Q8N812 135 aaPredicted RBP12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 PPTC7Q8NI37 304 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 CHURC1Q8WUH1 139 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 LINC01599Q8WXQ3 324 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 EMID1Q96A84 441 aaPredicted RBP12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 BBC3Q96PG8 261 aaPredicted RBP12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 WASF3Q9UPY6 502 aa12.13□□□□□ -0.47
AP003900.1-202ENST00000616952 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 TTC3P53804 2025 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 ICAM1P05362 532 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 FOXC1Q12948 553 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 MTX1Q13505 466 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 CCDC6Q16204 474 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 KANK3Q6NY19 840 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 RSAD2Q8WXG1 361 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 LZTS1Q9Y250 596 aa12.12□□□□□ -0.47
AP003900.1-202ENST00000616952 PRKAB2O43741 272 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 PDE6AP16499 860 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 LPIN1Q14693 890 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 SEPT14Q6ZU15 432 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
AP003900.1-202ENST00000616952 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 B4DLN1 442 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 CHRNA1P02708 482 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 SMIM10L2AP0DMW4 78 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 SMIM10L2BP0DMW5 78 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 RASA1P20936 1047 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 SLC9C2Q5TAH2 1124 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 PSAPL1Q6NUJ1 521 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 FEZF2Q8TBJ5 459 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 MKL1Q969V6 931 aa12.1□□□□□ -0.47
AP003900.1-202ENST00000616952 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms