RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 MIER3Q7Z3K6 550 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 CKAP2LQ8IYA6 745 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 ATP8B4Q8TF62 1192 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 FOXP1Q9H334 677 aaPredicted RBP18.87■□□□□ 0.61
CBWD3-211ENST00000615061 VAV3Q9UKW4 847 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 COL6A3P12111 3177 aa18.87■□□□□ 0.61
CBWD3-211ENST00000615061 EML1O00423 815 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 JAK3P52333 1124 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 FAM20AQ96MK3 541 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 NAP1L4Q99733 375 aaKnown RBP18.86■□□□□ 0.61
CBWD3-211ENST00000615061 FTOQ9C0B1 505 aaKnown RBP eCLIP18.86■□□□□ 0.61
CBWD3-211ENST00000615061 GBF1Q92538 1859 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 GRXCR1A8MXD5 290 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 RSPH10B2B2RC85 870 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 ZBTB42B2RXF5 422 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 RSPH10BP0C881 870 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 SFNP31947 248 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 RFC2P35250 354 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 GNL2Q13823 731 aaKnown RBP18.86■□□□□ 0.61
CBWD3-211ENST00000615061 TCTN1Q2MV58 587 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 DNAJB3Q8WWF6 145 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 HERVK_113Q902F9 699 aa18.86■□□□□ 0.61
CBWD3-211ENST00000615061 RRN3P2A6NIE6 340 aa18.85■□□□□ 0.61
CBWD3-211ENST00000615061 HBP1O60381 514 aa18.85■□□□□ 0.61
CBWD3-211ENST00000615061 NOSTRINQ8IVI9 506 aa18.85■□□□□ 0.61
CBWD3-211ENST00000615061 FAM49AQ9H0Q0 323 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-211ENST00000615061 SMC3Q9UQE7 1217 aa18.85■□□□□ 0.61
CBWD3-211ENST00000615061 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 TBX3O15119 743 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 MARCH6O60337 910 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 PFKMP08237 780 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 MCM7P33993 719 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 PRKCEQ02156 737 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 PPP2R5CQ13362 524 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 CUL4AQ13619 759 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 NBR1Q14596 966 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 TAF2Q6P1X5 1199 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 MTHFD1LQ6UB35 978 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 BANK1Q8NDB2 785 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 BBXQ8WY36 941 aaPredicted RBP18.84■□□□□ 0.61
CBWD3-211ENST00000615061 TMEM60Q9H2L4 133 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
CBWD3-211ENST00000615061 TMEM150BA6NC51 233 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 ZBBXA8MT70 800 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 NEMFO60524 1076 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 CXCL10P02778 98 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 U2AF2P26368 475 aaKnown RBP eCLIP18.83■□□□□ 0.61
CBWD3-211ENST00000615061 KLRC1P26715 233 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 SPIRE1Q08AE8 756 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 CALCRLQ16602 461 aa18.83■□□□□ 0.61
CBWD3-211ENST00000615061 TNPO1Q92973 898 aaKnown RBP18.83■□□□□ 0.61
CBWD3-211ENST00000615061 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-211ENST00000615061 CHRNA1P02708 482 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 OATP04181 439 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 TMEM62Q0P6H9 643 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 ZNF174Q15697 407 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 RDM1Q8NG50 284 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 KIF3AQ9Y496 699 aa18.83■□□□□ 0.6
CBWD3-211ENST00000615061 MICAL3Q7RTP6 2002 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 ZNF484Q5JVG2 852 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 MCTP1Q6DN14 999 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 NCAPH2Q6IBW4 605 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 Q7L0L9 218 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 PCDHA2Q9Y5H9 948 aa18.82■□□□□ 0.6
CBWD3-211ENST00000615061 CAND2O75155 1236 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 STBD1O95210 358 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 BAG4O95429 457 aaKnown RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 PARNO95453 639 aaKnown RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 TXKP42681 527 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 TOB1P50616 345 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 MGAT3Q09327 533 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 SLFN12Q8IYM2 578 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 WRAP73Q9P2S5 460 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 COL1A2P08123 1366 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 C22orf31O95567 290 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 ACTN1P12814 892 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 PBX2P40425 430 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 SMAD3P84022 425 aaKnown RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 FAM26DQ5JW98 314 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 TTC38Q5R3I4 469 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 DBF4BQ8NFT6 615 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 FAM167AQ96KS9 214 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 MTIF3Q9H2K0 278 aaKnown RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
CBWD3-211ENST00000615061 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 RGL1Q9NZL6 768 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 PCDHA12Q9UN75 941 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 SLC4A7Q9Y6M7 1214 aa18.81■□□□□ 0.6
CBWD3-211ENST00000615061 SMIM35A0A1B0GVV1 85 aa18.8■□□□□ 0.6
CBWD3-211ENST00000615061 H3BQV1 296 aa18.8■□□□□ 0.6
CBWD3-211ENST00000615061 GHRP10912 638 aa18.8■□□□□ 0.6
CBWD3-211ENST00000615061 CNKSR3Q6P9H4 555 aa18.8■□□□□ 0.6
CBWD3-211ENST00000615061 RSPH3Q86UC2 560 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms