RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 WDR35Q9P2L0 1181 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PAIP2BQ9ULR5 123 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TMCO1Q9UM00 188 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 AGTPBP1Q9UPW5 1226 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NOD1Q9Y239 953 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CARMIL1Q5VZK9 1371 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ERICH3Q5RHP9 1530 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TNIKQ9UKE5 1360 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 C17orf113A0A1B0GUU1 675 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 A0A1W2PRU2 124 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 HNRNPCL2B2RXH8 293 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RNF113AO15541 343 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 HNRNPCL1O60812 293 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TROVE2P10155 538 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CDK4P11802 303 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ATP6V1B1P15313 513 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NEK3P51956 506 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CLNS1AP54105 237 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 BNIP1Q12981 228 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 IKQ13123 557 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SAFBQ15424 915 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KRT71Q3SY84 523 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TNNI3KQ59H18 835 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FBXW10Q5XX13 1052 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FAM196AQ6ZSG2 479 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ALYREFQ86V81 257 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FAM20CQ8IXL6 584 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RTKN2Q8IZC4 609 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RNF10Q8N5U6 811 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 C7orf31Q8N865 590 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KCT2Q8NC54 265 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ARRDC4Q8NCT1 418 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CACTINQ8WUQ7 758 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GTF3C6Q969F1 213 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 LSM14BQ9BX40 385 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PUS3Q9BZE2 481 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KCTD10Q9H3F6 313 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 OSBPL3Q9H4L5 887 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NCOA5Q9HCD5 579 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TIMMDC1Q9NPL8 285 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ANO2Q9NQ90 1003 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PRDM11Q9NQV5 511 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PAPOLBQ9NRJ5 636 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 INIPQ9NRY2 104 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ATP8A2Q9NTI2 1148 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 DUSP12Q9UNI6 340 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RRP7AQ9Y3A4 280 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ERBINQ96RT1 1412 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 B4DLN1 442 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KIF28PB7ZC32 967 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NVLO15381 856 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RFPL1O75677 317 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CAPNS1P04632 268 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SSBP05455 408 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GLI1P08151 1106 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 P4HA1P13674 534 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 STMN1P16949 149 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CES1P23141 567 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ATP6V1E1P36543 226 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 HAAOP46952 286 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MAN2A2P49641 1150 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 LIMK1P53667 647 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GJA9P57773 515 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PIN1Q13526 163 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TUBA3CQ13748 450 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MAP7Q14244 749 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SSPNQ14714 243 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PLCB4Q15147 1175 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TCEA2Q15560 299 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SLC14A2Q15849 920 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 HECTD3Q5T447 861 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FAM173BQ6P4H8 233 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF600Q6ZNG1 722 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 C3orf62Q6ZUJ4 267 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RAPH1Q70E73 1250 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 EEPD1Q7L9B9 569 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TMC7Q7Z402 723 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 EXOC3L1Q86VI1 746 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC13Q8IYE1 715 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SYCP3Q8IZU3 236 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SPARTQ8N0X7 666 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NKAPQ8N5F7 415 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TMCO5AQ8N6Q1 288 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SMARCC2Q8TAQ2 1214 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NPLOC4Q8TAT6 608 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RASGRP4Q8TDF6 673 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 DIS3LQ8TF46 1054 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF606Q8WXB4 792 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GJA10Q969M2 543 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GPRASP2Q96D09 838 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SNF8Q96H20 258 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FNBP1Q96RU3 617 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SLC13A1Q9BZW2 595 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 UBE2OQ9C0C9 1292 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ATXN10Q9UBB4 475 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NPATQ14207 1427 aa3.32□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF804BA4D1E1 1349 aa3.32□□□□□ -1.88
CBWD3-209ENST00000614377 NCOA2Q15596 1464 aa3.32□□□□□ -1.88
CBWD3-209ENST00000614377 ATAD2BQ9ULI0 1458 aa3.32□□□□□ -1.88
CBWD3-209ENST00000614377 A0A1B0GVC2 190 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms