RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TRAPPC12Q8WVT3 735 aa20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 ZBTB10Q96DT7 871 aa20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 FAM20AQ96MK3 541 aa20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 FTOQ9C0B1 505 aaKnown RBP eCLIP20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 FOXP1Q9H334 677 aaPredicted RBP20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 VAV3Q9UKW4 847 aa20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 KIF3AQ9Y496 699 aa20.39■□□□□ 0.85
SEMA3B-211ENST00000612509 RSPH10B2B2RC85 870 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 WNT7AO00755 349 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 RSPH10BP0C881 870 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 ACTN1P12814 892 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 SMAD3P84022 425 aaKnown RBP20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 UGCGQ16739 394 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 FAM109BQ6ICB4 259 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 GPR153Q6NV75 609 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 RPAINQ86UA6 219 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 CKAP2LQ8IYA6 745 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 BBXQ8WY36 941 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 HAS1Q92839 578 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 FAM167AQ96KS9 214 aa20.38■□□□□ 0.85
SEMA3B-211ENST00000612509 GBF1Q92538 1859 aa20.37■□□□□ 0.85
SEMA3B-211ENST00000612509 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
SEMA3B-211ENST00000612509 PRKCEQ02156 737 aa20.37■□□□□ 0.85
SEMA3B-211ENST00000612509 PPP2R5CQ13362 524 aa20.37■□□□□ 0.85
SEMA3B-211ENST00000612509 PTPRSQ13332 1948 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 ZBTB42B2RXF5 422 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 KIF28PB7ZC32 967 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 ZNF862O60290 1169 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 NEMFO60524 1076 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 OATP04181 439 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 RPLP2P05387 115 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 GJB2P29033 226 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 ZNF484Q5JVG2 852 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 CNKSR3Q6P9H4 555 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 RSPH3Q86UC2 560 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 DNAJB3Q8WWF6 145 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 FAM49AQ9H0Q0 323 aaPredicted RBP20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 MICAL3Q7RTP6 2002 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 SZT2Q5T011 3432 aa20.36■□□□□ 0.85
SEMA3B-211ENST00000612509 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 RBAK-RBAKDNI3L0D1 243 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 MARCH6O60337 910 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 BAIAP3O94812 1187 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 MGAT3Q09327 533 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 CALCRLQ16602 461 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 FAM26DQ5JW98 314 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 TRMT1LQ7Z2T5 733 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 NOSTRINQ8IVI9 506 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 SLFN12Q8IYM2 578 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 CEP131Q9UPN4 1083 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 PCDHA2Q9Y5H9 948 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 SLC4A7Q9Y6M7 1214 aa20.35■□□□□ 0.85
SEMA3B-211ENST00000612509 EML1O00423 815 aa20.34■□□□□ 0.85
SEMA3B-211ENST00000612509 BAG4O95429 457 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-211ENST00000612509 C22orf31O95567 290 aa20.34■□□□□ 0.85
SEMA3B-211ENST00000612509 TCTN1Q2MV58 587 aa20.34■□□□□ 0.85
SEMA3B-211ENST00000612509 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
SEMA3B-211ENST00000612509 SMIM35A0A1B0GVV1 85 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 CHRNA1P02708 482 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 ATP2B1P20020 1258 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 KLRC1P26715 233 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 MRPS6P82932 125 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 SPIRE1Q08AE8 756 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 CUL4AQ13619 759 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 BANK1Q8NDB2 785 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 SLC9A7Q96T83 725 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 CDY2AQ9Y6F7 541 aa20.33■□□□□ 0.85
SEMA3B-211ENST00000612509 EVPLQ92817 2033 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 DNAJB2P25686 324 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 U2AF2P26368 475 aaKnown RBP eCLIP20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 MCM7P33993 719 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 TRAPPC10P48553 1259 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 WDR5P61964 334 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 PLEKHG4Q58EX7 1191 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 TTC38Q5R3I4 469 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 ZNF697Q5TEC3 545 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 NCAPH2Q6IBW4 605 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 Q7L0L9 218 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 PBX4Q9BYU1 374 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 OSBPL7Q9BZF2 842 aa20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 SEPT9Q9UHD8 586 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-211ENST00000612509 M0QZ92 97 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 GHRP10912 638 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 ATP2A2P16615 1042 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 PBX2P40425 430 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 KCNJ6P48051 423 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 PSMC5P62195 406 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 ORC2Q13416 577 aaPredicted RBP20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 DBF4BQ8NFT6 615 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 SEPT8Q92599 483 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 MTMR9Q96QG7 549 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 TMEM60Q9H2L4 133 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 NRBP2Q9NSY0 501 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 TRPV2Q9Y5S1 764 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms