RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
GRAMD1A-211ENST00000599564 NUCKS1Q9H1E3 243 aaKnown RBP18.28■□□□□ 0.52
GRAMD1A-211ENST00000599564 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
GRAMD1A-211ENST00000599564 COL18A1P39060 1754 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 BHMG1C9JSJ3 638 aaPredicted RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ASAP2O43150 1006 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 USP17L8P0C7I0 530 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 IGHMBP2P38935 993 aaKnown RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ALKBH5Q6P6C2 394 aaKnown RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 RNF25Q96BH1 459 aaPredicted RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 SAAL1Q96ER3 474 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 CALR3Q96L12 384 aaKnown RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 MLXIPLQ9NP71 852 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 BATF3Q9NR55 127 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ABCB11O95342 1321 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 AFF2P51816 1311 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 GSTA1P08263 222 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ZBTB48P10074 688 aaPredicted RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 SLC9A1P19634 815 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 BRD2P25440 801 aaKnown RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ITIH4Q14624 930 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 MIS18BP1Q6P0N0 1132 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 TNS2Q63HR2 1409 aa18.27■□□□□ 0.52
GRAMD1A-211ENST00000599564 CCDC188H7C350 402 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 RGS16O15492 202 aaPredicted RBP18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 SMNDC1O75940 238 aaKnown RBP eCLIP18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 MMP13P45452 471 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 RIPK1Q13546 671 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 SLC29A2Q14542 456 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 THEMIS2Q5TEJ8 643 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 NEK8Q86SG6 692 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 HOOK3Q86VS8 718 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 KCNMB3Q9NPA1 279 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 NAGPAQ9UK23 515 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 PNMA3Q9UL41 463 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 STX8Q9UNK0 236 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 SNX24Q9Y343 169 aa18.27■□□□□ 0.51
GRAMD1A-211ENST00000599564 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 PVALEFA0A1B0GWK0 134 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 SMCO2A6NFE2 343 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 PPFIA2O75334 1257 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 CENPTQ96BT3 561 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 AIPL1Q9NZN9 384 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 AP1G2O75843 785 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 PMS2P54278 862 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 ZNF211Q13398 564 aaPredicted RBP18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 SNX29Q8TEQ0 813 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 KLHL29Q96CT2 875 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 GANQ9H2C0 597 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 ERVK-5Q9HDB9 667 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 FAM114A2Q9NRY5 505 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 DBR1Q9UK59 544 aaKnown RBP18.26■□□□□ 0.51
GRAMD1A-211ENST00000599564 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 CFAP73A6NFT4 308 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 CES2O00748 559 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 DENND2CQ68D51 928 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 SLITRK6Q9H5Y7 841 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 OSGEPQ9NPF4 335 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 SLC37A4O43826 429 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 EVI5O60447 810 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 COASYQ13057 564 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 ECM1Q16610 540 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 TRIM68Q6AZZ1 485 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 OTUD6AQ7L8S5 288 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 FBXO25Q8TCJ0 367 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 FGFR1OP2Q9NVK5 253 aa18.25■□□□□ 0.51
GRAMD1A-211ENST00000599564 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 FOXO6A8MYZ6 492 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 EIF3BP55884 814 aaKnown RBP18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 ZCWPW2Q504Y3 356 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 RAD54LQ92698 747 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 SEMA4AQ9H3S1 761 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 TDP2O95551 362 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 FGFR4P22455 802 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 ABL2P42684 1182 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 KCNH2Q12809 1159 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 TRIM59Q8IWR1 403 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 CCHCR1Q8TD31 782 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 TXLNGYQ9BZA5 131 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 ZHX3Q9H4I2 956 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 RIC8AQ9NPQ8 531 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 CCDC88AQ3V6T2 1871 aa18.24■□□□□ 0.51
GRAMD1A-211ENST00000599564 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
GRAMD1A-211ENST00000599564 IL2RBP14784 551 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms