RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SLC43A3Q8NBI5 491 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 LEO1Q8WVC0 666 aaPredicted RBP24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 BBXQ8WY36 941 aaPredicted RBP24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 AK8Q96MA6 479 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 POLR3CQ9BUI4 534 aaPredicted RBP24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 TUFT1Q9NNX1 390 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 ATP11BQ9Y2G3 1177 aa24.78■■□□□ 1.56
CHMP2A-204ENST00000597848 MYH15Q9Y2K3 1946 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 HBP1O60381 514 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 PQBP1O60828 265 aaKnown RBP24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 MED24O75448 989 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 INSRRP14616 1297 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 RPA1P27694 616 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 UBA7P41226 1012 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 CDK7P50613 346 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 RTP1P59025 263 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 IGBP1P78318 339 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 PTPN11Q06124 597 aaPredicted RBP24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 XKR3Q5GH77 459 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 SPECC1Q5M775 1068 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 HTATIP2Q9BUP3 242 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 SETD4Q9NVD3 440 aa24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 WRAP73Q9P2S5 460 aaPredicted RBP24.77■■□□□ 1.56
CHMP2A-204ENST00000597848 C17orf102A2RUQ5 167 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 SPATA31C1P0DKV0 1188 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 TRIM60Q495X7 471 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 C1orf53Q5VUE5 145 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 CABP7Q86V35 215 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 SESTD1Q86VW0 696 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 C4orf19Q8IY42 314 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 SEPT9Q9UHD8 586 aaPredicted RBP24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 GTF2IRD1Q9UHL9 959 aa24.76■■□□□ 1.55
CHMP2A-204ENST00000597848 SCN10AQ9Y5Y9 1956 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 CUTAO60888 179 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 GNAT1P11488 350 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 TLE2Q04725 743 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 SNX17Q15036 470 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 GRIK4Q16099 956 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 ZNF484Q5JVG2 852 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 RASSF8Q8NHQ8 419 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 CDK5RAP3Q96JB5 506 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 GDPD2Q9HCC8 539 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 PCDHA7Q9UN72 937 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 NOD1Q9Y239 953 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 MROH7Q68CQ1 1323 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 NRCAMQ92823 1304 aa24.75■■□□□ 1.55
CHMP2A-204ENST00000597848 A0A087WWV3 80 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 RRN3P2A6NIE6 340 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 DCDC2CA8MYV0 355 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 TLR3O15455 904 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 STBD1O95210 358 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 YWHABP31946 246 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 GDF6Q6KF10 455 aaPredicted RBP24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 POTEGQ6S5H5 508 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 OTUD6AQ7L8S5 288 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 MMTAG2Q9BU76 263 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 TRPV6Q9H1D0 765 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 TRMT13Q9NUP7 481 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 KIAA1024Q9UPX6 916 aa24.74■■□□□ 1.55
CHMP2A-204ENST00000597848 TMEM150BA6NC51 233 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 LYPLA2O95372 231 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 ZNF200P98182 395 aaPredicted RBP24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 PTGISQ16647 500 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 ANKRD33Q7Z3H0 272 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 LMBR1Q8WVP7 490 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 TRAPPC12Q8WVT3 735 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 SYMPKQ92797 1274 aaKnown RBP24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 CALML4Q96GE6 196 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 EPSTI1Q96J88 318 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 NACC1Q96RE7 527 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 PLIN2Q99541 437 aa24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 NIFKQ9BYG3 293 aaKnown RBP24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 DDX19AQ9NUU7 478 aaKnown RBP24.73■■□□□ 1.55
CHMP2A-204ENST00000597848 KDM3AQ9Y4C1 1321 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 ZBTB39O15060 712 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 B4GALT4O60513 344 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 MUTP22033 750 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 TXLNAP40222 546 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 HIC1Q14526 733 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 ECM1Q16610 540 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 MTERF2Q49AM1 385 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 TPRNQ4KMQ1 711 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 PLA2G4FQ68DD2 849 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 USP49Q70CQ1 688 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 ANO5Q75V66 913 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 FAM126BQ8IXS8 530 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 ZNF579Q8NAF0 562 aaKnown RBP24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 PIGOQ8TEQ8 1089 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 DPF3Q92784 378 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 CCDC43Q96MW1 224 aaKnown RBP24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 TOX2Q96NM4 488 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 SH2D3AQ9BRG2 576 aa24.72■■□□□ 1.55
CHMP2A-204ENST00000597848 XKR9Q5GH70 373 aa24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 AXDND1Q5T1B0 1012 aaPredicted RBP24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 CEP170P1Q96L14 293 aa24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 CCSER1Q9C0I3 900 aa24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 NT5C3AQ9H0P0 336 aa24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 MYH9P35579 1960 aaKnown RBP24.71■■□□□ 1.55
CHMP2A-204ENST00000597848 COL1A2P08123 1366 aa24.7■■□□□ 1.55
CHMP2A-204ENST00000597848 TREHO43280 583 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms