RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 BTG3Q14201 252 aaPredicted RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 ADGRD2Q7Z7M1 963 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 SMRP1Q8NCR6 262 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 GTF3C6Q969F1 213 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 ZNF689Q96CS4 500 aaPredicted RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 MTMR8Q96EF0 704 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 GPR20Q99678 358 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 LLPHQ9BRT6 129 aaKnown RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 MAP3K20Q9NYL2 800 aaKnown RBP17.59■□□□□ 0.41
FOXA3-202ENST00000594297 PCDHA1Q9Y5I3 950 aa17.59■□□□□ 0.41
FOXA3-202ENST00000594297 CFAP54Q96N23 3096 aa17.58■□□□□ 0.41
FOXA3-202ENST00000594297 LOC730098B7Z3J9 87 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 ZBTB5O15062 677 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 DNAJB1P25685 340 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 ZXDAP98168 799 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
FOXA3-202ENST00000594297 MGAT3Q09327 533 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 TROAPQ12815 778 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 SEMA3FQ13275 785 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 LPIN1Q14693 890 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 METTL7BQ6UX53 244 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 EHMT1Q9H9B1 1298 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 CLEC1BQ9P126 229 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 ZNF215Q9UL58 517 aaPredicted RBP17.58■□□□□ 0.4
FOXA3-202ENST00000594297 MRPL42Q9Y6G3 142 aaKnown RBP17.58■□□□□ 0.4
FOXA3-202ENST00000594297 TTC3P53804 2025 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 PLXNA3P51805 1871 aa17.58■□□□□ 0.4
FOXA3-202ENST00000594297 FRMPD4Q14CM0 1322 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 MRPS9P82933 396 aaKnown RBP17.57■□□□□ 0.4
FOXA3-202ENST00000594297 GRM4Q14833 912 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 SLC35G1Q2M3R5 365 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
FOXA3-202ENST00000594297 HOMER1Q86YM7 354 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 FBXL6Q8N531 539 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 NECAB1Q8N987 351 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 LINC01599Q8WXQ3 324 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
FOXA3-202ENST00000594297 PRRX2Q99811 253 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 PLVAPQ9BX97 442 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
FOXA3-202ENST00000594297 KLRF2D3W0D1 207 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 GFRA3O60609 400 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 GLP2RO95838 553 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 ITGB1P05556 798 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 ICAM3P32942 547 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 SP4Q02446 784 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 SCRN1Q12765 414 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 CUL4AQ13619 759 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 GNPTABQ3T906 1256 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 EFHBQ8N7U6 833 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 P2RX5Q93086 422 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 MYL10Q9BUA6 226 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 MAD2L2Q9UI95 211 aa17.56■□□□□ 0.4
FOXA3-202ENST00000594297 BARX2Q9UMQ3 279 aaPredicted RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
FOXA3-202ENST00000594297 NID2Q14112 1375 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 ENPP3O14638 875 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 DGKIO75912 1065 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 RXRAP19793 462 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 COASYQ13057 564 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 NEDD9Q14511 834 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 PKN1Q16512 942 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 RAB11FIP4Q86YS3 637 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 WASF1Q92558 559 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 PPP2R3CQ969Q6 453 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 PCDHGC5Q9Y5F6 944 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 KAT6AQ92794 2004 aa17.55■□□□□ 0.4
FOXA3-202ENST00000594297 NRCAMQ92823 1304 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 SPATA31C2B4DYI2 1134 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 FIBPO43427 364 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 LARGE1O95461 756 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 PDIA4P13667 645 aaKnown RBP17.54■□□□□ 0.4
FOXA3-202ENST00000594297 NRIP1P48552 1158 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 SSRP1Q08945 709 aaKnown RBP17.54■□□□□ 0.4
FOXA3-202ENST00000594297 FBXO47Q5MNV8 452 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 SPPL3Q8TCT6 385 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 PIGSQ96S52 555 aa17.54■□□□□ 0.4
FOXA3-202ENST00000594297 NCOA5Q9HCD5 579 aaKnown RBP17.54■□□□□ 0.4
FOXA3-202ENST00000594297 PALM3A6NDB9 673 aaPredicted RBP17.53■□□□□ 0.4
FOXA3-202ENST00000594297 IFNAR1P17181 557 aa17.53■□□□□ 0.4
FOXA3-202ENST00000594297 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
FOXA3-202ENST00000594297 SIGLEC14Q08ET2 396 aa17.53■□□□□ 0.4
FOXA3-202ENST00000594297 PAN2Q504Q3 1202 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms