RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 CCDC155Q8N6L0 562 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 LXNQ9BS40 222 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 PPP1R12CQ9BZL4 782 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
DNMT1-227ENST00000592342 ZSWIM4Q9H7M6 989 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 RGL1Q9NZL6 768 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 SEPT9Q9UHD8 586 aaPredicted RBP23.29■■□□□ 1.32
DNMT1-227ENST00000592342 VWA3AA6NCI4 1184 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 TRIM43BA6NCK2 446 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 DDX11L8A8MPP1 907 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 KIAA0355O15063 1070 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 TREHO43280 583 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 ZNF862O60290 1169 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 PTK7Q13308 1070 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 HIC1Q14526 733 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 PDIA5Q14554 519 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 HAUS3Q68CZ6 603 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 TRIM43Q96BQ3 446 aaPredicted RBP23.28■■□□□ 1.32
DNMT1-227ENST00000592342 USP28Q96RU2 1077 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 HIPK3Q9H422 1215 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 TUBE1Q9UJT0 475 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 TBX21Q9UL17 535 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 STK24Q9Y6E0 443 aa23.28■■□□□ 1.32
DNMT1-227ENST00000592342 COL1A2P08123 1366 aa23.27■■□□□ 1.32
DNMT1-227ENST00000592342 HOXC8P31273 242 aa23.27■■□□□ 1.32
DNMT1-227ENST00000592342 BFSP2Q13515 415 aa23.27■■□□□ 1.32
DNMT1-227ENST00000592342 RETREG2Q8NC44 543 aa23.27■■□□□ 1.32
DNMT1-227ENST00000592342 TRAPPC12Q8WVT3 735 aa23.27■■□□□ 1.32
DNMT1-227ENST00000592342 LBHD1Q9BQE6 289 aaPredicted RBP23.27■■□□□ 1.32
DNMT1-227ENST00000592342 H0YGN5 161 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 SLITRK3O94933 977 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 NUCB2P80303 420 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 STK38Q15208 465 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 KRT79Q5XKE5 535 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 C4orf19Q8IY42 314 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 IGSF22Q8N9C0 903 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 CAGE1Q8TC20 777 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 HSD17B14Q9BPX1 270 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 TUFT1Q9NNX1 390 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 ATP6V1DQ9Y5K8 247 aa23.26■■□□□ 1.31
DNMT1-227ENST00000592342 TIMP1P01033 207 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 CCT6AP40227 531 aaKnown RBP23.25■■□□□ 1.31
DNMT1-227ENST00000592342 ADAM17P78536 824 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 IL17AQ16552 155 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 MTERF2Q49AM1 385 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 TAF2Q6P1X5 1199 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 OTUD6AQ7L8S5 288 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 SERINC5Q86VE9 423 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 SNX29Q8TEQ0 813 aa23.25■■□□□ 1.31
DNMT1-227ENST00000592342 CCDC43Q96MW1 224 aaKnown RBP23.25■■□□□ 1.31
DNMT1-227ENST00000592342 NOC4LQ9BVI4 516 aaKnown RBP23.25■■□□□ 1.31
DNMT1-227ENST00000592342 TFIP11Q9UBB9 837 aaKnown RBP23.25■■□□□ 1.31
DNMT1-227ENST00000592342 KLRC1P26715 233 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 MARCKSP29966 332 aaPredicted RBP23.24■■□□□ 1.31
DNMT1-227ENST00000592342 YWHABP31946 246 aaKnown RBP23.24■■□□□ 1.31
DNMT1-227ENST00000592342 PTPAQ15257 358 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 MARCH8Q5T0T0 291 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 MTHFD1LQ6UB35 978 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 RSPH3Q86UC2 560 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 CATSPER3Q86XQ3 398 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 CTAGE1Q96RT6 745 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 POLR3CQ9BUI4 534 aaPredicted RBP23.24■■□□□ 1.31
DNMT1-227ENST00000592342 WRAP73Q9P2S5 460 aaPredicted RBP23.24■■□□□ 1.31
DNMT1-227ENST00000592342 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
DNMT1-227ENST00000592342 MKI67P46013 3256 aaKnown RBP23.24■■□□□ 1.31
DNMT1-227ENST00000592342 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 MBLAC1A4D2B0 266 aaPredicted RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 MED24O75448 989 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 RPA1P27694 616 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 CYP2C18P33260 490 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 THPOP40225 353 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 NASPP49321 788 aaPredicted RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 SLC39A14Q15043 492 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 ATL3Q6DD88 541 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 DHX38Q92620 1227 aaKnown RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 BADQ92934 168 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 NIFKQ9BYG3 293 aaKnown RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 CFAP45Q9UL16 551 aa23.23■■□□□ 1.31
DNMT1-227ENST00000592342 RBM19Q9Y4C8 960 aaKnown RBP23.23■■□□□ 1.31
DNMT1-227ENST00000592342 TMEM150BA6NC51 233 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 PP2D1A8MPX8 630 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 PITPNM1O00562 1244 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 MAGEB2O15479 319 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 LYPLA2O95372 231 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 CCL23P55773 120 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 MDM2Q00987 491 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-227ENST00000592342 DNM1Q05193 864 aaKnown RBP23.22■■□□□ 1.31
DNMT1-227ENST00000592342 TBC1D8BQ0IIM8 1120 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 PLA2G4FQ68DD2 849 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 ANO5Q75V66 913 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 TMEM199Q8N511 208 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 ZBTB10Q96DT7 871 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 CEP170P1Q96L14 293 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 AK8Q96MA6 479 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 SH2D3AQ9BRG2 576 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 FAM49AQ9H0Q0 323 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-227ENST00000592342 PCDH10Q9P2E7 1040 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 PCDHA2Q9Y5H9 948 aa23.22■■□□□ 1.31
DNMT1-227ENST00000592342 UMODL1Q5DID0 1318 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms