RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 TRIM58Q8NG06 486 aa17.06■□□□□ 0.32
CXXC1-214ENST00000590901 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
CXXC1-214ENST00000590901 ATAD5Q96QE3 1844 aa17.06■□□□□ 0.32
CXXC1-214ENST00000590901 DNM2P50570 870 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 SLC7A5Q01650 507 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 NNTQ13423 1086 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 KDM7AQ6ZMT4 941 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 SH2D3CQ8N5H7 860 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 GIMAP7Q8NHV1 300 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 ZIM3Q96PE6 472 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 EPN3Q9H201 632 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 STIM2Q9P246 746 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 TACC1O75410 805 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 LSP1P33241 339 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 NAA35Q5VZE5 725 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 NUP58Q9BVL2 599 aa17.05■□□□□ 0.32
CXXC1-214ENST00000590901 MAGEC2Q9UBF1 373 aaPredicted RBP17.05■□□□□ 0.32
CXXC1-214ENST00000590901 ZNF536O15090 1300 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 DDNO94850 711 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 PRLRP16471 622 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 CYP27A1Q02318 531 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 HAUS3Q68CZ6 603 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 TTYH3Q9C0H2 523 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 THAP9Q9H5L6 903 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 AGPAT5Q9NUQ2 364 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 PCDHA12Q9UN75 941 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 E9PMD0 336 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 PEX10O60683 326 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 MRPS25P82663 173 aaKnown RBP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 ZBED6P86452 979 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 APBA1Q02410 837 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 NEDD9Q14511 834 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
CXXC1-214ENST00000590901 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 KCNMB3Q9NPA1 279 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 MYH10P35580 1976 aa17.04■□□□□ 0.32
CXXC1-214ENST00000590901 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 POTECB2RU33 542 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 ASNSP08243 561 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 MTMR2Q13614 643 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 KCTD16Q68DU8 428 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
CXXC1-214ENST00000590901 FGFBP2Q9BYJ0 223 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 COL20A1Q9P218 1284 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 B4DLN1 442 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 MEIS1O00470 390 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
CXXC1-214ENST00000590901 TCP1P17987 556 aaKnown RBP17.03■□□□□ 0.32
CXXC1-214ENST00000590901 PSMC6P62333 389 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 SPP2Q13103 211 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 PLCB4Q15147 1175 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 SPA17Q15506 151 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
CXXC1-214ENST00000590901 CCDC181Q5TID7 509 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 ETNPPLQ8TBG4 499 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 AK8Q96MA6 479 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 OSBPL9Q96SU4 736 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 EMILIN3Q9NT22 766 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 MCM8Q9UJA3 840 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 HYOU1Q9Y4L1 999 aa17.03■□□□□ 0.32
CXXC1-214ENST00000590901 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 NFIBO00712 420 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 MED24O75448 989 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 SMTNP53814 917 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 ACTN3Q08043 901 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-214ENST00000590901 PREPLQ4J6C6 727 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-214ENST00000590901 LDHDQ86WU2 507 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 SMCR8Q8TEV9 937 aaPredicted RBP17.02■□□□□ 0.32
CXXC1-214ENST00000590901 TRIM47Q96LD4 638 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 WDR18Q9BV38 432 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.32
CXXC1-214ENST00000590901 GGA3Q9NZ52 723 aa17.02■□□□□ 0.32
CXXC1-214ENST00000590901 ERCC3P19447 782 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 ASIC1P78348 528 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 CDK17Q00537 523 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 PTGISQ16647 500 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 CFAP58Q5T655 872 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 EMC10Q5UCC4 262 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 C8orf74Q6P047 294 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 SLC39A2Q9NP94 309 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 KLC4Q9NSK0 619 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 GGA2Q9UJY4 613 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 CAPN6Q9Y6Q1 641 aa17.02■□□□□ 0.31
CXXC1-214ENST00000590901 ZBTB39O15060 712 aa17.01■□□□□ 0.31
CXXC1-214ENST00000590901 MARCH6O60337 910 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms