RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
SF3A2-204ENST00000589118 ATOH1Q92858 354 aaPredicted RBP17.35■□□□□ 0.37
SF3A2-204ENST00000589118 TRPV2Q9Y5S1 764 aa17.35■□□□□ 0.37
SF3A2-204ENST00000589118 MYO10Q9HD67 2058 aa17.35■□□□□ 0.37
SF3A2-204ENST00000589118 NFX1Q12986 1120 aaKnown RBP17.34■□□□□ 0.37
SF3A2-204ENST00000589118 TRAF1Q13077 416 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
SF3A2-204ENST00000589118 LLGL2Q6P1M3 1020 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 EVPLQ92817 2033 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 CUL5Q93034 780 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 PPP2R3CQ969Q6 453 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 PPP1R16BQ96T49 567 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 SMOC2Q9H3U7 446 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 SMARCAD1Q9H4L7 1026 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 LRFN2Q9ULH4 789 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 GINS2Q9Y248 185 aa17.34■□□□□ 0.37
SF3A2-204ENST00000589118 TBKBP1A7MCY6 615 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 PLEKHA8P1O95397 391 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 RXRAP19793 462 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 NUCB1Q02818 461 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 TRDNQ13061 729 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 PAK2Q13177 524 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 PLCB4Q15147 1175 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 NAALADL2Q58DX5 795 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 IER5Q5VY09 327 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 ATP8B4Q8TF62 1192 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 SUSD6Q92537 303 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 GPRASP2Q96D09 838 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
SF3A2-204ENST00000589118 TRPC6Q9Y210 931 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 UBIAD1Q9Y5Z9 338 aa17.33■□□□□ 0.36
SF3A2-204ENST00000589118 IGSF9BQ9UPX0 1349 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 ERICH2A1L162 156 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 E7EWF7 191 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 FGF18O76093 207 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 STAG3L1P0CL83 205 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 ARP10275 920 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
SF3A2-204ENST00000589118 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
SF3A2-204ENST00000589118 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 TMEM40Q8WWA1 233 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
SF3A2-204ENST00000589118 S1PR5Q9H228 398 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
SF3A2-204ENST00000589118 TMEM260Q9NX78 707 aa17.32■□□□□ 0.36
SF3A2-204ENST00000589118 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
SF3A2-204ENST00000589118 HIP1O00291 1037 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 PIK3CDO00329 1044 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 FGFR1P11362 822 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 TECP42680 631 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 MTMR1Q13613 665 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 DUSP6Q16828 381 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 ASCL5Q7RTU5 278 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 CATIPQ7Z7H3 387 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 PGBD1Q96JS3 809 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 FTHL17Q9BXU8 183 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 PCDHB7Q9Y5E2 793 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 MYO15AQ9UKN7 3530 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 CFAP54Q96N23 3096 aa17.31■□□□□ 0.36
SF3A2-204ENST00000589118 RRN3P2A6NIE6 340 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 HIDE1A8MVS5 230 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PBX3P40426 434 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
SF3A2-204ENST00000589118 KRT76Q01546 638 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 SYCE2Q6PIF2 218 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 THNSL1Q8IYQ7 743 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 COLGALT1Q8NBJ5 622 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 ADAM2Q99965 735 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PSTPIP2Q9H939 334 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PCDHA6Q9UN73 950 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PCDHB12Q9Y5F1 795 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PCDHA8Q9Y5H6 950 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 PCDHA2Q9Y5H9 948 aa17.3■□□□□ 0.36
SF3A2-204ENST00000589118 SPTBN4Q9H254 2564 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 M0QZ92 97 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 KCNC3Q14003 757 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 ANKRD54Q6NXT1 300 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 KANK3Q6NY19 840 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 MTHFD1LQ6UB35 978 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 RALYLQ86SE5 291 aaKnown RBP17.29■□□□□ 0.36
SF3A2-204ENST00000589118 ZBTB33Q86T24 672 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 NCOA7Q8NI08 942 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 FEZF2Q8TBJ5 459 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 NEK1Q96PY6 1258 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 PRRX2Q99811 253 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
SF3A2-204ENST00000589118 CWH43Q9H720 699 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 LY9Q9HBG7 655 aa17.29■□□□□ 0.36
SF3A2-204ENST00000589118 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms