RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 TLE2Q04725 743 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 PPFIA1Q13136 1202 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 HIC1Q14526 733 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 ATL3Q6DD88 541 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 GDF6Q6KF10 455 aaPredicted RBP16.36■□□□□ 0.21
CNN1-208ENST00000588935 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
CNN1-208ENST00000588935 DPF3Q92784 378 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 HSD17B14Q9BPX1 270 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 NRBP2Q9NSY0 501 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
CNN1-208ENST00000588935 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
CNN1-208ENST00000588935 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
CNN1-208ENST00000588935 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
CNN1-208ENST00000588935 EVPLQ92817 2033 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 C17orf102A2RUQ5 167 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 OATP04181 439 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 SPATA31C1P0DKV0 1188 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 CDK7P50613 346 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 ECM1Q16610 540 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 MTERF2Q49AM1 385 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 PLA2G4FQ68DD2 849 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 USP49Q70CQ1 688 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 PIGOQ8TEQ8 1089 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 ATP8B4Q8TF62 1192 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 LEO1Q8WVC0 666 aaPredicted RBP16.35■□□□□ 0.21
CNN1-208ENST00000588935 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
CNN1-208ENST00000588935 EPSTI1Q96J88 318 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 ZSWIM4Q9H7M6 989 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 NOD1Q9Y239 953 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
CNN1-208ENST00000588935 HBP1O60381 514 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
CNN1-208ENST00000588935 UBA7P41226 1012 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 GRIK4Q16099 956 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 PTGISQ16647 500 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 POTEGQ6S5H5 508 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 CABP7Q86V35 215 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 RASSF8Q8NHQ8 419 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
CNN1-208ENST00000588935 MMTAG2Q9BU76 263 aaKnown RBP16.34■□□□□ 0.21
CNN1-208ENST00000588935 PCDHA7Q9UN72 937 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 KIAA1024Q9UPX6 916 aa16.34■□□□□ 0.21
CNN1-208ENST00000588935 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 TREHO43280 583 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 B4GALT4O60513 344 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.2
CNN1-208ENST00000588935 PPP6R2O75170 966 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 STBD1O95210 358 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 CYP2C9P11712 490 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 RPA1P27694 616 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 SLC26A2P50443 739 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 NPEPPSP55786 919 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 XKR9Q5GH70 373 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 XKR3Q5GH77 459 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 C7orf61Q8IZ16 206 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
CNN1-208ENST00000588935 SLC43A3Q8NBI5 491 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 CDK5RAP3Q96JB5 506 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 FAM167AQ96KS9 214 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 POLR3CQ9BUI4 534 aaPredicted RBP16.33■□□□□ 0.2
CNN1-208ENST00000588935 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 TUFT1Q9NNX1 390 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 PRDM5Q9NQX1 630 aaPredicted RBP16.33■□□□□ 0.2
CNN1-208ENST00000588935 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
CNN1-208ENST00000588935 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.2
CNN1-208ENST00000588935 GTF2IRD1Q9UHL9 959 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 ALPK3Q96L96 1907 aa16.33■□□□□ 0.2
CNN1-208ENST00000588935 RBAK-RBAKDNI3L0D1 243 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 TLR3O15455 904 aaKnown RBP16.32■□□□□ 0.2
CNN1-208ENST00000588935 CUTAO60888 179 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 KLRC1P26715 233 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
CNN1-208ENST00000588935 KARSQ15046 597 aaKnown RBP16.32■□□□□ 0.2
CNN1-208ENST00000588935 ZNF484Q5JVG2 852 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 ANO5Q75V66 913 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 FAM126BQ8IXS8 530 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 C4orf19Q8IY42 314 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 SYMPKQ92797 1274 aaKnown RBP16.32■□□□□ 0.2
CNN1-208ENST00000588935 CEP170P1Q96L14 293 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
CNN1-208ENST00000588935 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
CNN1-208ENST00000588935 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 RRN3P2A6NIE6 340 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 E9PMD0 336 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 EVI5O60447 810 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNN1-208ENST00000588935 GNAT1P11488 350 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 PTPN11Q06124 597 aaPredicted RBP16.31■□□□□ 0.2
CNN1-208ENST00000588935 GRB10Q13322 594 aa16.31■□□□□ 0.2
CNN1-208ENST00000588935 DHX8Q14562 1220 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms