RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 VSIG10LQ86VR7 867 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
LIG3-203ENST00000585370 NACC1Q96RE7 527 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 TCEAL9Q9UHQ7 104 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 RIPK3Q9Y572 518 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 PFASO15067 1338 aa11.55□□□□□ -0.56
LIG3-203ENST00000585370 SMCHD1A6NHR9 2005 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 E9PMD0 336 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 SOX1O00570 391 aaPredicted RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 ZNF500O60304 480 aaPredicted RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 SLITRK3O94933 977 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 P4HBP07237 508 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 NR3C2P08235 984 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 IDEP14735 1019 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 ITGB5P18084 799 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 CYP11B2P19099 503 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 SFNP31947 248 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 RGS2P41220 211 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 SLC12A3P55017 1021 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 MRPS9P82933 396 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 EHHADHQ08426 723 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 MTMR1Q13613 665 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 LHX8Q68G74 356 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 GPBP1Q86WP2 473 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 C7orf61Q8IZ16 206 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 CCDC150Q8NCX0 1101 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 P2RX5Q93086 422 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 GJA10Q969M2 543 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 MED15Q96RN5 788 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 MPHOSPH6Q99547 160 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 AGO4Q9HCK5 861 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 PANK4Q9NVE7 773 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 CYP39A1Q9NYL5 469 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 BTBD7Q9P203 1132 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 LIMA1Q9UHB6 759 aaKnown RBP11.54□□□□□ -0.56
LIG3-203ENST00000585370 GDAQ9Y2T3 454 aa11.54□□□□□ -0.56
LIG3-203ENST00000585370 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIG3-203ENST00000585370 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 A0A1W2PPC1 479 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 FRMD3A2A2Y4 597 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 EML1O00423 815 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
LIG3-203ENST00000585370 LYPLA2O95372 231 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
LIG3-203ENST00000585370 TPM2P07951 284 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 MYCLP12524 364 aaPredicted RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 GAP43P17677 238 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 CLCN1P35523 988 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 JAK3P52333 1124 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 STX17P56962 302 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 KRT76Q01546 638 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 LRRC63Q05C16 580 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 STK4Q13043 487 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 MAP2K5Q13163 448 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 PLS1Q14651 629 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 NR1I3Q14994 352 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 CENPPQ6IPU0 288 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 SLC30A10Q6XR72 485 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 DYMQ7RTS9 669 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 APBA2Q99767 749 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 TSG101Q99816 390 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 GDF15Q99988 308 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 A1CFQ9NQ94 594 aaKnown RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 SAMSN1Q9NSI8 373 aaKnown RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 FLRT1Q9NZU1 646 aa11.53□□□□□ -0.56
LIG3-203ENST00000585370 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 ZMYND8Q9ULU4 1186 aaPredicted RBP11.53□□□□□ -0.56
LIG3-203ENST00000585370 RLFQ13129 1914 aa11.52□□□□□ -0.56
LIG3-203ENST00000585370 PARP14Q460N5 1801 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
LIG3-203ENST00000585370 COL6A1P12109 1028 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 PTGS1P23219 599 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 BMP8BP34820 402 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 CCNA1P78396 465 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 COASYQ13057 564 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.57
LIG3-203ENST00000585370 GNPTABQ3T906 1256 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 TTI2Q6NXR4 508 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 POTEGQ6S5H5 508 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 TMC6Q7Z403 805 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 VSTM4Q8IW00 320 aa11.52□□□□□ -0.57
LIG3-203ENST00000585370 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms