RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 F2P00734 622 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 CYP2C9P11712 490 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 COL6A1P12109 1028 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 CAPN2P17655 700 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 UBA7P41226 1012 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 QARSP47897 775 aaKnown RBP9.36□□□□□ -0.91
ERBB2-216ENST00000584014 ME1P48163 572 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 NKX3-2P78367 333 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 KRT85P78386 507 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 ATP2C1P98194 919 aaPredicted RBP9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PRKCEQ02156 737 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PLCB4Q15147 1175 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 EPHA7Q15375 998 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 IL17AQ16552 155 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PTGISQ16647 500 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 MTERF2Q49AM1 385 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 KRT79Q5XKE5 535 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PLPPR4Q7Z2D5 763 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 SNX29Q8TEQ0 813 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 ZBTB10Q96DT7 871 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 CLIC6Q96NY7 704 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 LXNQ9BS40 222 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 NRBP2Q9NSY0 501 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 TMEM39AQ9NV64 488 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 CHMP5Q9NZZ3 219 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 PRKAG2Q9UGJ0 569 aa9.36□□□□□ -0.91
ERBB2-216ENST00000584014 EMSYQ7Z589 1322 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 ZBTB39O15060 712 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 B4GALT4O60513 344 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 LGR5O75473 907 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 OATP04181 439 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 P4HBP07237 508 aaKnown RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 INSRRP14616 1297 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 SYN1P17600 705 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 PSMC5P62195 406 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 GRIN1Q05586 938 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 PTPAQ15257 358 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 GRIK4Q16099 956 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 XKR9Q5GH70 373 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 PLA2G4FQ68DD2 849 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 GDF6Q6KF10 455 aaPredicted RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 POTEGQ6S5H5 508 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 CABP7Q86V35 215 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 METTL13Q8N6R0 699 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 RDM1Q8NG50 284 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 PIGOQ8TEQ8 1089 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 SPATA32Q96LK8 384 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 FAM49AQ9H0Q0 323 aaPredicted RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 CSRNP2Q9H175 543 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 ZSWIM4Q9H7M6 989 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 SUGCTQ9HAC7 445 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
ERBB2-216ENST00000584014 WDR81Q562E7 1941 aa9.35□□□□□ -0.91
ERBB2-216ENST00000584014 BRCA2P51587 3418 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 MROH7Q68CQ1 1323 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 IGKV6D-21A0A0A0MT36 114 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 HAS3O00219 553 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 TREHO43280 583 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 ZNF862O60290 1169 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 HBP1O60381 514 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 MED24O75448 989 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 SLITRK3O94933 977 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 CLTBP09497 229 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 GNAT1P11488 350 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 ATP4AP20648 1035 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 KLRC1P26715 233 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 TXLNAP40222 546 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 PRPHP41219 470 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 MLLT1Q03111 559 aaPredicted RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 SPIRE1Q08AE8 756 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 PDIA5Q14554 519 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 SLC39A14Q15043 492 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 ARL6IP4Q66PJ3 421 aaKnown RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 HAUS3Q68CZ6 603 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 NFRKBQ6P4R8 1299 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 MAEAQ7L5Y9 396 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 OTUD6AQ7L8S5 288 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 CATSPER3Q86XQ3 398 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 KRI1Q8N9T8 703 aaKnown RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 LINC00301Q8NCQ3 95 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 AFAP1L1Q8TED9 768 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 CALML4Q96GE6 196 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 CEP170P1Q96L14 293 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 PPP1R16BQ96T49 567 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 DDX19AQ9NUU7 478 aaKnown RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 GTF2IRD1Q9UHL9 959 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
ERBB2-216ENST00000584014 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
ERBB2-216ENST00000584014 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-216ENST00000584014 TCHHQ07283 1943 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms