RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 MUC3AQ02505 3323 aa12.41□□□□□ -0.42
CHD3-216ENST00000573936 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.4□□□□□ -0.42
CHD3-216ENST00000573936 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.4□□□□□ -0.42
CHD3-216ENST00000573936 LAD1O00515 517 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 WNT7AO00755 349 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 STX6O43752 255 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 OR52Z1P0C646 297 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 HOXC8P31273 242 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 TXKP42681 527 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 FPGSQ05932 587 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 EPHA7Q15375 998 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 RETREG2Q8NC44 543 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 ATP8B4Q8TF62 1192 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 BBXQ8WY36 941 aaPredicted RBP12.4□□□□□ -0.42
CHD3-216ENST00000573936 GJA10Q969M2 543 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 HIPK3Q9H422 1215 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
CHD3-216ENST00000573936 VAV3Q9UKW4 847 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
CHD3-216ENST00000573936 BMP15O95972 392 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 RPLP2P05387 115 aaKnown RBP12.39□□□□□ -0.43
CHD3-216ENST00000573936 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
CHD3-216ENST00000573936 CYP2C9P11712 490 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 TOB1P50616 345 aaPredicted RBP12.39□□□□□ -0.43
CHD3-216ENST00000573936 PSMC5P62195 406 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 GRIK4Q16099 956 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 TMEM199Q8N511 208 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 NEK9Q8TD19 979 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 RAB34Q9BZG1 259 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
CHD3-216ENST00000573936 SETD4Q9NVD3 440 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 CEP131Q9UPN4 1083 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 COL1A2P08123 1366 aa12.39□□□□□ -0.43
CHD3-216ENST00000573936 IGSF9BQ9UPX0 1349 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 CAND2O75155 1236 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
CHD3-216ENST00000573936 INSRRP14616 1297 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 PRPHP41219 470 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 QARSP47897 775 aaKnown RBP12.38□□□□□ -0.43
CHD3-216ENST00000573936 ADAM17P78536 824 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
CHD3-216ENST00000573936 PTGDRQ13258 359 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 C4orf32Q8N8J7 132 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 GAS2L1Q99501 681 aaPredicted RBP12.38□□□□□ -0.43
CHD3-216ENST00000573936 NOC4LQ9BVI4 516 aaKnown RBP12.38□□□□□ -0.43
CHD3-216ENST00000573936 PPP1R12CQ9BZL4 782 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 MTMR6Q9Y217 621 aa12.38□□□□□ -0.43
CHD3-216ENST00000573936 MBLAC1A4D2B0 266 aaPredicted RBP12.37□□□□□ -0.43
CHD3-216ENST00000573936 EML1O00423 815 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 TREHO43280 583 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 OATP04181 439 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 ATP4AP20648 1035 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 COL9A1P20849 921 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 DNAJB2P25686 324 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 RFC2P35250 354 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 TECP42680 631 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■□□□□ 8.5
CHD3-216ENST00000573936 IGBP1P78318 339 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 PRKCEQ02156 737 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 RBL2Q08999 1139 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 SPIRE1Q08AE8 756 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 RESTQ13127 1097 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.434e-6■■□□□ 13.5
CHD3-216ENST00000573936 PDIA5Q14554 519 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 NBR1Q14596 966 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 XKR3Q5GH77 459 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
CHD3-216ENST00000573936 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 LMBR1Q8WVP7 490 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
CHD3-216ENST00000573936 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 TUBE1Q9UJT0 475 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
CHD3-216ENST00000573936 MAGEB2O15479 319 aa12.36□□□□□ -0.43
CHD3-216ENST00000573936 ZNF862O60290 1169 aa12.36□□□□□ -0.43
CHD3-216ENST00000573936 CYP2C18P33260 490 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms