RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 IBSPP21815 317 aaPredicted RBP16.38■□□□□ 0.21
CIITA-205ENST00000571186 DNAJB1P25685 340 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 CMTR2Q8IYT2 770 aaKnown RBP16.38■□□□□ 0.21
CIITA-205ENST00000571186 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 KLHL23Q8NBE8 558 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 JADE2Q9NQC1 790 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 TRPV2Q9Y5S1 764 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 SQORQ9Y6N5 450 aa16.38■□□□□ 0.21
CIITA-205ENST00000571186 FNDC1Q4ZHG4 1894 aaPredicted RBP16.37■□□□□ 0.21
CIITA-205ENST00000571186 MYH9P35579 1960 aaKnown RBP16.37■□□□□ 0.21
CIITA-205ENST00000571186 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 MAFGO15525 162 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 PRC1O43663 620 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 PPFIA3O75145 1194 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 ADGRD2Q7Z7M1 963 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 RBM23Q86U06 439 aaKnown RBP16.37■□□□□ 0.21
CIITA-205ENST00000571186 TMTC2Q8N394 836 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 EDAQ92838 391 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
CIITA-205ENST00000571186 MSLNLQ96KJ4 702 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 PCYT2Q99447 389 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 LRRC2Q9BYS8 371 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 SLC9A2Q9UBY0 812 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 ZDBF2Q9HCK1 2354 aa16.37■□□□□ 0.21
CIITA-205ENST00000571186 MYO10Q9HD67 2058 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 EYA4O95677 639 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 SCG2P13521 617 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 RXRAP19793 462 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 NRIP1P48552 1158 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 PAK2Q13177 524 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 CRIPAKQ8N1N5 446 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 EFHBQ8N7U6 833 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 TRAPPC12Q8WVT3 735 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 POF1BQ8WVV4 589 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 CELF4Q9BZC1 486 aaKnown RBP16.36■□□□□ 0.21
CIITA-205ENST00000571186 JPH1Q9HDC5 661 aaPredicted RBP16.36■□□□□ 0.21
CIITA-205ENST00000571186 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
CIITA-205ENST00000571186 MCM5P33992 734 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 GATMP50440 423 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
CIITA-205ENST00000571186 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
CIITA-205ENST00000571186 HEATR3Q7Z4Q2 680 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 RAB11FIP4Q86YS3 637 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 MICAL1Q8TDZ2 1067 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 SDF4Q9BRK5 362 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 KCNH7Q9NS40 1196 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 CLEC1BQ9P126 229 aa16.35■□□□□ 0.21
CIITA-205ENST00000571186 CALM1P0DP23 149 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 CALM2P0DP24 149 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 CALM3P0DP25 149 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 STAT5BP51692 787 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 ACTR2P61160 394 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 KRT76Q01546 638 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 PLCB4Q15147 1175 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 TMEM266Q2M3C6 531 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 TMEM87BQ96K49 555 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 TLE6Q9H808 572 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 GINS2Q9Y248 185 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 PCDHB7Q9Y5E2 793 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 IGSF9BQ9UPX0 1349 aa16.34■□□□□ 0.21
CIITA-205ENST00000571186 TMEM221A6NGB7 291 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 M0R296 226 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.2
CIITA-205ENST00000571186 CPA1P15085 419 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 COASYQ13057 564 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 TRIM67Q6ZTA4 783 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 PLPPR4Q7Z2D5 763 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 NME8Q8N427 588 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 SMRP1Q8NCR6 262 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 NEK1Q96PY6 1258 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 BARX2Q9UMQ3 279 aaPredicted RBP16.33■□□□□ 0.2
CIITA-205ENST00000571186 PCDHB12Q9Y5F1 795 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 SLC12A7Q9Y666 1083 aa16.33■□□□□ 0.2
CIITA-205ENST00000571186 SMIM35A0A1B0GVV1 85 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 PER2O15055 1255 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 NFASCO94856 1347 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 GLP2RO95838 553 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 ARP10275 920 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 KLRC1P26715 233 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 HSPA4P34932 840 aa16.32■□□□□ 0.2
CIITA-205ENST00000571186 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms