RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 FAM26DQ5JW98 314 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 RUFY4Q6ZNE9 571 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 VAV3Q9UKW4 847 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 SAMM50Q9Y512 469 aa12.5□□□□□ -0.41
SHCBP1-207ENST00000569702 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 MYH9P35579 1960 aaKnown RBP12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 COL1A2P08123 1366 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 CHMP2AO43633 222 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 ZNF862O60290 1169 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 RPLP2P05387 115 aaKnown RBP12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 ACTN1P12814 892 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 IGBP1P78318 339 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 ZNF484Q5JVG2 852 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 ZBTB10Q96DT7 871 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
SHCBP1-207ENST00000569702 SMIM35A0A1B0GVV1 85 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 EML1O00423 815 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 CTSHP09668 335 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 KLRC1P26715 233 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 SPIRE1Q08AE8 756 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 MGAT3Q09327 533 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 UGCGQ16739 394 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 TCTN1Q2MV58 587 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 CKAP2LQ8IYA6 745 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 DNAJB3Q8WWF6 145 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 FAM167AQ96KS9 214 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 OSBPL7Q9BZF2 842 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
SHCBP1-207ENST00000569702 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 GRXCR1A8MXD5 290 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 KIF28PB7ZC32 967 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 STBD1O95210 358 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 OATP04181 439 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 PRKCEQ02156 737 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 CUL4AQ13619 759 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 PLEKHG4Q58EX7 1191 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 NME8Q8N427 588 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 CEP131Q9UPN4 1083 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
SHCBP1-207ENST00000569702 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 TMEM265A0A087WTH1 108 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 ABHD14A-ACY1A0A1B0GW23 586 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 ZBBXA8MT70 800 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 NEMFO60524 1076 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 BAG4O95429 457 aaKnown RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 C22orf31O95567 290 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 GJB2P29033 226 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 TRAPPC10P48553 1259 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 CALCRLQ16602 461 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 Q7L0L9 218 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 KIAA0319LQ8IZA0 1049 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 PHOSPHO2Q8TCD6 241 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 PBX4Q9BYU1 374 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 FAM49AQ9H0Q0 323 aaPredicted RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 NRBP2Q9NSY0 501 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
SHCBP1-207ENST00000569702 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 MAGEB2O15479 319 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 MARCH6O60337 910 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 EFCAB14O75071 495 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 DNAJB2P25686 324 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 PBX2P40425 430 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 WDR5P61964 334 aaKnown RBP12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 PSMC5P62195 406 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 IKBKEQ14164 716 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 EPHA7Q15375 998 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 FBXO47Q5MNV8 452 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 IER5Q5VY09 327 aa12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
SHCBP1-207ENST00000569702 DEFB123Q8N688 67 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms